Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01570 ATGACCAGAATTTTTTCTGAGGAGAAGGTTTTTTGTCAATTTCCATTAAATCTAAGGATTCTTGTCATTGATATTGACCCTTTAGTTCTTGAATTCATCAAGAAAACATGCAATGAATGTTGTTATCAAGTTATGACATGCACAGAATCGCTACATGTTGCTGATATTTGTAGGGACAGAAAAGTGAGTTTTAATTTGGTGCTGATGGAGGTTCATATGCCAAACATGGATGGATACGAATTTCTTTTGAGTCAGAAAATGGATGTTCCTGTCATTATGATGTCTTTTGATGATGATAAAAAATCTGTAATGAAGGCTATTAAACTTGGAGCTTGTGATTATTGGATCAAGCCTTTGCATGAGGATCGAATCAAGAATATGTGGACACATGTTGTTAGGAAGTCCATGAGTGGGAACAAGATGCAGAAAGAAATTATTGGCAACTTGGAAGACGATGATAAAAAAAAAATGATTAGTAGTGATGATTCTACATTTGTTTTTTCGTCTACTGTTGAAATTTCAAGAGAAGTTCATAATGTTGGTGAATCTAAGAATTGTGGCAAAAAGAAGTCTCGTATAGTATGGACATCAGAACTGCATCGTAAATTTGTTGAAGTTGTGGATCAAATTGGACTTGCTAGTTTGGTCCCAAAAGGAGAGCACCAATCTTTCTTAGACATGCAACTGGATAATCATTTTCATGCTGAACAAGCTTTGGTTTTGGCACATGGTTACCCCTTCACTACCTATCCTAACACTATTATTCCCCAGAATTTTCCACACTCCATTGGGACTCTAGATGATGCATCTACACATGGACTATGGTCTTCATATAATACAGTGTTTGCTGGAAATCAAGCTATGTTGCAGAGCAACAATGACATATTGTAG 891 0.3591 MTRIFSEEKVFCQFPLNLRILVIDIDPLVLEFIKKTCNECCYQVMTCTESLHVADICRDRKVSFNLVLMEVHMPNMDGYEFLLSQKMDVPVIMMSFDDDKKSVMKAIKLGACDYWIKPLHEDRIKNMWTHVVRKSMSGNKMQKEIIGNLEDDDKKKMISSDDSTFVFSSTVEISREVHNVGESKNCGKKKSRIVWTSELHRKFVEVVDQIGLASLVPKGEHQSFLDMQLDNHFHAEQALVLAHGYPFTTYPNTIIPQNFPHSIGTLDDASTHGLWSSYNTVFAGNQAMLQSNNDIL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01570 296 Gene3D - 17 147 - -
Phco8g01570 296 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 223 IPR045279 GO:0009736
Phco8g01570 296 Gene3D - 187 231 - -
Phco8g01570 296 SMART REC_2 18 128 IPR001789 GO:0000160
Phco8g01570 296 NCBIfam myb-like DNA-binding domain, SHAQKYF class 190 219 IPR006447 GO:0003677
Phco8g01570 296 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Phco8g01570 296 CDD REC_typeB_ARR-like 20 132 - -
Phco8g01570 296 Pfam Response regulator receiver domain 20 127 IPR001789 GO:0000160
Phco8g01570 296 SUPERFAMILY CheY-like 17 139 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01570 Phco-Chr8 16125643 16128621 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco8g01570 Response_reg 5.1e-16 CL0304