Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01569 ATGGCCAAAATTTCTTCTCCTGCTATTGACAGTAAGGACACAGTTGAAGTCCCATCAACTCTTACTGTCCTTGCCATTGACACTGACTTAACAGTTCTTGAATTCATCAAGAAAGAGTGCAACAAGTATGGTAATCAAGTTATGGTATGCACTGATTCTCTACATGCTGTGACTCTTTTACGGGAAAGAGAAGAGCGTACTGATTTGATACTCATAGAGGTTCATATGCCATCCATGGATGGCTATGAATTCCTACAACTTGTCAACCGAGAAGAAATTAATGTTCCTCTCATTATGATGTCTTTGGATGATATTAGGCCTTCCATAACGAAGGCTATTAAACTTGGAGCTTCTGATTATTGGATTAAACCGTTGCATGAGTATCAGTTCAAGAGCATGTGGACACATGTACTTAAGAAGTACATAAGTGAAGATAAGGCCCAAAAAGATACTGGTAGCATGGAAGATGATAATAAAATAAGAGGGAGAAGTGACAATTCTGACTTTGCTTCATCTATGGTTTATAGGAGCAATAGCAATTTTAGAGAAGCCGATGATGTTGATGAATCAAATCCATCCTCCATAAAGAAGAAGAATCGTGTAGTATGGTCACCAGAAATGCATCTTGAATTTGTTGAAGCTATAGAAAAAACTGGTGGAATTGAAAATGCTGTACCAAAGAAAATTCTTGAAGTCATGGATACTCCTGGTTTGGAAAGAGCACATGTTGCTAGTCATTTGCAGAAATATAGAAAATTCTTGAAACAGCAAGAGCAACAACAACAGAATGAGATGTCATCGGTTTCAGGAAACACAGAACCTTTACCCGCTACTACACTGACAAATTTTCATGCAGAACAAACTTTGGCACCTGATTTTCCTTTAGCAACCTTTCCTAACATGGGCATTACTAATTTTTCACAGTTCATGGGAATTGCAGATGATGGTTCTATATATAGATTATATTCTTTATCTGATAAAATGCTATCCATGCTTCAGAGAAATAATATGCAGCAGTCAAGGATGCATCATAATCAAATTCATCCGATGAACTTTCAGCCATCTTCCATTATAATTTCTGGAAATCCAGCTTCTGTCCCCCAGAATTACAACTTTGGCATGAACATGGATCATGGTTTAATATCATCTCAATCAATCCAAGTTGAAAACGGCATTGGAGAAGTCATTCGCAAACAATATACTACTAGATCTTCCATTTATTACCCACACCTTCAAAATACAGGTGATTATAGCCAAAATTCCTCCACAGATATTGATGATGAACAATGGATCAAACCATCACAAGCCTGA 1311 0.3715 MAKISSPAIDSKDTVEVPSTLTVLAIDTDLTVLEFIKKECNKYGNQVMVCTDSLHAVTLLREREERTDLILIEVHMPSMDGYEFLQLVNREEINVPLIMMSLDDIRPSITKAIKLGASDYWIKPLHEYQFKSMWTHVLKKYISEDKAQKDTGSMEDDNKIRGRSDNSDFASSMVYRSNSNFREADDVDESNPSSIKKKNRVVWSPEMHLEFVEAIEKTGGIENAVPKKILEVMDTPGLERAHVASHLQKYRKFLKQQEQQQQNEMSSVSGNTEPLPATTLTNFHAEQTLAPDFPLATFPNMGITNFSQFMGIADDGSIYRLYSLSDKMLSMLQRNNMQQSRMHHNQIHPMNFQPSSIIISGNPASVPQNYNFGMNMDHGLISSQSIQVENGIGEVIRKQYTTRSSIYYPHLQNTGDYSQNSSTDIDDEQWIKPSQA 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01569 436 FunFam Two-component response regulator 194 258 - -
Phco8g01569 436 Pfam Response regulator receiver domain 23 130 IPR001789 GO:0000160
Phco8g01569 436 SMART REC_2 21 134 IPR001789 GO:0000160
Phco8g01569 436 Gene3D - 20 158 - -
Phco8g01569 436 MobiDBLite consensus disorder prediction 255 277 - -
Phco8g01569 436 Gene3D - 194 257 - -
Phco8g01569 436 SUPERFAMILY Homeodomain-like 196 255 IPR009057 -
Phco8g01569 436 NCBIfam myb-like DNA-binding domain, SHAQKYF class 198 252 IPR006447 GO:0003677
Phco8g01569 436 ProSiteProfiles Response regulatory domain profile. 22 138 IPR001789 GO:0000160
Phco8g01569 436 SUPERFAMILY CheY-like 19 152 IPR011006 -
Phco8g01569 436 MobiDBLite consensus disorder prediction 148 164 - -
Phco8g01569 436 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 255 IPR017930 -
Phco8g01569 436 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 285 IPR045279 GO:0009736
Phco8g01569 436 MobiDBLite consensus disorder prediction 411 436 - -
Phco8g01569 436 MobiDBLite consensus disorder prediction 148 170 - -
Phco8g01569 436 CDD REC_typeB_ARR-like 23 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01569 Phco-Chr8 16121718 16123817 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco8g01569 Response_reg 6.5e-17 CL0304