Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phco8g01555 | ATGGACGAAGATTCCCTCAAACGCAATACCGATTGTGTTTATTTCTTAGCGTCTCCCCTCACTTGCAAGAAGGGGGCAGAATGTGAGTATCGCCACAATGAGATTGCCAGGCTTAACCCTAGGGATTGCTGGTACTGGGTATCTGGCGAATGCCTTAATCCAACGTGTGCTTTTAGACACCCTCCTCTGGATGGGCACACTGGAGTGCCAGCACCATCTGAACCTACACAAAATTCATTGCCTGCAAACAAGACAATGGTACCGTGTTTTTTTTTCTTCAATGGATTTTGCAACAAAGGTGACAAATGCTCTTTTTTGCATGGGTCTGATGATAGCATTTTTACTGGAAAACCTGTGAAGAATGATAACGGAAGCACCGATGCACACAATCTAGAAAATAAATCATCATCAGGAAATGGAACTGGTGTAGCGTCAGTACCAACTCACCAATCTTTAACTGCTCCAAAGCATTGGTCTGATTTTAAGCTTCAGCCCAAGGAAGATCATCAGTTACAGTTAACCAAAAATGTCAAGCAGCAAGGCGATTCCTTAGTGATATCTGCTCCTGAATATAAAGCAGCTGCAGTGTGTAGGTCGGACTCTCCGTTTCCAGATGATGGCTTTGTTCATAATATATCTCATTTACGCACTGAGCAGGGTTCGGAGGAGCAAGTAAATAGTCAAATTGAGCCTGAGGAGCGGTGGGAATCATCCCCTCATTCCCCTGGATTTGACGTTCTTGTTCACGATGAATTGGAGAACGTCGGTTACGAGGAAGATTCTGAATATTTACCAGTGCTTGATAGGAATGAGCAAGAGCTGAATGAACAGTACCTGGGGCATGAATTTAAAGATCTAATTGACTATGATACTATGTGCCCAGAAGCTGATATTCTGTATCCACAAGAAACATATGATGGTTACAGATGTTTTGATAGAGACCCTGCTCATGGTAATGGCAGAACAGTTCGTACTTATTCCAGAGATATATTCTTAGATTCTATATTCTCCAGAAAAAGGATTCGGATGTCAGCTGAGGTGGCTGCTTATGACAGTAATTTAGATCTACGTGACCATCTGAGGAGACGTAGAGAAAATAATGGGCCTCCCGTTGCAGGTTTCTTAAGAAGACAAGAATCGTCTTCTTTAATGATTCGAAACCCGGAAAGGCATCAGAGGCCTGGCATTGAGCAGCGGCCAAGTAGAAGATTGACATCACAACTGGGATATAGTGCTATAGATTCGATTGGAGAGGTTGAAACTCTTTCAATCGCTAACAAGCACAGGTTATTCAGGCGTTCCCAGCAACATAGACCACGGAAGCATTATAGAGAAAAACCAGTCAAACGACCATTTCTGTCATCTAAAATATCCAGGAAACCAGTTTCTAAACAAAGGGGATTTATTCAAGAATCCACTACATTTTCAGGACCTAAGTCTCTTGCAGAAATTAAAGAAGAGAAGAAGAAGGCCGAGGAAGGTTTACATTGGAAAAACACATCAACTGATTTCCAGGATCCCAAACCTCTGAGTGAAATTCTCAAGGACAAAAGGACCATGGATTAG | 1566 | 0.4246 | MDEDSLKRNTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWVSGECLNPTCAFRHPPLDGHTGVPAPSEPTQNSLPANKTMVPCFFFFNGFCNKGDKCSFLHGSDDSIFTGKPVKNDNGSTDAHNLENKSSSGNGTGVASVPTHQSLTAPKHWSDFKLQPKEDHQLQLTKNVKQQGDSLVISAPEYKAAAVCRSDSPFPDDGFVHNISHLRTEQGSEEQVNSQIEPEERWESSPHSPGFDVLVHDELENVGYEEDSEYLPVLDRNEQELNEQYLGHEFKDLIDYDTMCPEADILYPQETYDGYRCFDRDPAHGNGRTVRTYSRDIFLDSIFSRKRIRMSAEVAAYDSNLDLRDHLRRRRENNGPPVAGFLRRQESSSLMIRNPERHQRPGIEQRPSRRLTSQLGYSAIDSIGEVETLSIANKHRLFRRSQQHRPRKHYREKPVKRPFLSSKISRKPVSKQRGFIQESTTFSGPKSLAEIKEEKKKAEEGLHWKNTSTDFQDPKPLSEILKDKRTMD | 521 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phco8g01555 | 521 | MobiDBLite | consensus disorder prediction | 486 | 521 | - | - | |
Phco8g01555 | 521 | FunFam | Zinc finger CCCH domain-containing protein 17 | 1 | 63 | - | - | |
Phco8g01555 | 521 | ProSiteProfiles | Zinc finger C3H1-type profile. | 83 | 110 | IPR000571 | GO:0046872 | |
Phco8g01555 | 521 | MobiDBLite | consensus disorder prediction | 118 | 147 | - | - | |
Phco8g01555 | 521 | Pfam | RNA-binding, Nab2-type zinc finger | 88 | 108 | - | - | |
Phco8g01555 | 521 | SUPERFAMILY | CCCH zinc finger | 83 | 108 | IPR036855 | GO:0046872 | |
Phco8g01555 | 521 | ProSiteProfiles | Zinc finger C3H1-type profile. | 37 | 63 | IPR000571 | GO:0046872 | |
Phco8g01555 | 521 | Gene3D | - | 74 | 141 | - | - | |
Phco8g01555 | 521 | Gene3D | - | 2 | 63 | - | - | |
Phco8g01555 | 521 | MobiDBLite | consensus disorder prediction | 462 | 479 | - | - | |
Phco8g01555 | 521 | MobiDBLite | consensus disorder prediction | 432 | 447 | - | - | |
Phco8g01555 | 521 | ProSiteProfiles | Zinc finger C3H1-type profile. | 6 | 35 | IPR000571 | GO:0046872 | |
Phco8g01555 | 521 | Pfam | Zinc-finger containing family | 7 | 63 | IPR041686 | - | |
Phco8g01555 | 521 | MobiDBLite | consensus disorder prediction | 432 | 452 | - | - | |
Phco8g01555 | 521 | PANTHER | ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING | 1 | 520 | - | - | |
Phco8g01555 | 521 | SMART | c3hfinal6 | 7 | 34 | IPR000571 | GO:0046872 | |
Phco8g01555 | 521 | SMART | c3hfinal6 | 83 | 109 | IPR000571 | GO:0046872 | |
Phco8g01555 | 521 | SMART | c3hfinal6 | 39 | 62 | IPR000571 | GO:0046872 | |
Phco8g01555 | 521 | MobiDBLite | consensus disorder prediction | 462 | 481 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phco8g01555 | Phco-Chr8 | 15995626 | 15997855 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Phco8g01555 | zf-CCCH_3 | 2.4e-11 | CL0537 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phco8g01555 | 8 | 15995626 | 15997855 | Phco8g01555 | 8 | 15995626 | 15997855 | ECH |