Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01538 ATGGAGGACAGAAAAGCCAACATAATCTCTGTGATATCAGTGATTGCACTGATCATATTCATCATCGTTGTACGCGTCTCCTTCAAGCTTTCACATGCCTTCTTCCTCGTTTGTGGCGCTTCTATTGCTGTCATCATCGCGATCTTTTCTTGTGCACTCATAAGGCACCGTTACAACTGCAGGAGGAGGTTGTTGGAGTTACAGTTGAAGACGGAAGGACGAGAGCTTCGAATAGAGTACAGTTTCTTAAGAAAAGTTGCTGGGGTTCCCACGAAGTTTCGTTACAAGGAACTTGAGGAAGCAACGGATGGGTTTCAATCACTGTTGGGAAGAGGGTCCTCAGCTGCGGTCTTCAAAGGCATTCTCAGCGATGGAACTTCGGTTGCAGTGAAACGGATCGATGGAGAGGAGCGTGGGGAGAAGGAGTTCAGATCAGAAGTTGCAGCCATTGCTAGCGTGCACCATGTCAACCTCGTGCGCATGTTTGGTTATTGTAACGCCCCCACAGCGCCTAGGTACCTTGTTTATGAGTACATTCCAAACGGGTCTTTGGATTGTTGGATCTTTCCCTCAAGGGAAAACCGTGCACGTAAAAGTGGGTGTTTGCCATGGAACTCGAGGTATAAGGTTGCGATTGATGTTGCCAGAGCGTTGTCTTATCTTCACCATGATTGCAGGAAGAGGGTTTTGCACCTAGACGTAAAGCCCGAAAATATACTCTTGGATGAGGATTATAAGGCTCTTGTTTCTGATTTTGGTCTCTCAACGCTTATTGGCAATGATGTGAGTCAGGTCATGACGACGATGAGGGGGACAAGAGGGTACTTGGCTCCTGAGTGGCTTTTGGAAAGAGGGGTGTCAGAAAAAACTGATATTTACAGTTATGGGATGGTTTTGTTGGAAATAGTTGGAGGGAGAAGGAATGTTATGAGGGTGGAGGATCCGAAGGACAGGACTAAGAAAAAGTGGGAGTTTTTTCCCAAGATTGTTAACGAGAAAGTGAGGGAGGGGAAGTTCATGGAGATTGTGGATCATAGATTGATTGAAAGTGGGGGTATTGAGGAGAGGGAGGTGATTAGATTAGTGAATATTGCATTGTGGTGTATACAAGAGAAGCCAAGGTTGAGACCTAGCATGGCACAAGTGGTTGATATGCTTGAGCAGCGTGTGAGGGTGGATGAACCCCCTGGTTCCAGAATGATCCTTGTTGATATACTAGCTGTTGATGAAGACCCTGTAGATAATCGAAATCTTGCAAGGTTGTTGACCTCAGTTTCGAGCAATGTAGATTGTACATCTACTTACTCCCTGGGAACCACTATTTTATCTGGCAGATAG 1338 0.4581 MEDRKANIISVISVIALIIFIIVVRVSFKLSHAFFLVCGASIAVIIAIFSCALIRHRYNCRRRLLELQLKTEGRELRIEYSFLRKVAGVPTKFRYKELEEATDGFQSLLGRGSSAAVFKGILSDGTSVAVKRIDGEERGEKEFRSEVAAIASVHHVNLVRMFGYCNAPTAPRYLVYEYIPNGSLDCWIFPSRENRARKSGCLPWNSRYKVAIDVARALSYLHHDCRKRVLHLDVKPENILLDEDYKALVSDFGLSTLIGNDVSQVMTTMRGTRGYLAPEWLLERGVSEKTDIYSYGMVLLEIVGGRRNVMRVEDPKDRTKKKWEFFPKIVNEKVREGKFMEIVDHRLIESGGIEEREVIRLVNIALWCIQEKPRLRPSMAQVVDMLEQRVRVDEPPGSRMILVDILAVDEDPVDNRNLARLLTSVSSNVDCTSTYSLGTTILSGR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01538 445 Pfam Protein kinase domain 107 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01538 445 FunFam Putative receptor-like protein kinase 179 394 - -
Phco8g01538 445 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Phco8g01538 445 Gene3D Phosphorylase Kinase; domain 1 70 178 - -
Phco8g01538 445 FunFam Putative receptor-like protein kinase 70 178 - -
Phco8g01538 445 ProSiteProfiles Protein kinase domain profile. 103 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01538 445 Gene3D Transferase(Phosphotransferase) domain 1 179 395 - -
Phco8g01538 445 PANTHER OS07G0415500 PROTEIN 29 397 - -
Phco8g01538 445 SUPERFAMILY Protein kinase-like (PK-like) 85 387 IPR011009 -
Phco8g01538 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Phco8g01538 445 SMART serkin_6 103 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01538 Phco-Chr8 15870363 15871700 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phco8g01538 Pkinase 3.5e-44 CL0016