Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01515 ATGGCGCCGCTCACAATTATCGTTTTCCTCCTCCAACTCACTTCTCATGTCCGAGTCAACTCGGAGCCGACTCAGGACAAGCAAGCGCTCCTTGCTTTCCTCTCCCAAACCCCACACTCCAACCGCCTCCAGTGGAACGCTTCCGCTTCCGCATGCGACTGGGTGGGCGTCAAATGCGACGCCTCACGCTCCTTCGTCTACTCGCTCCGTTTACCCGCCGTCGACCTCGTGGGTCCGATCCCACCCGCCACAATCGGTCGCCTCTCCCAGCTTCGGATCCTCAGTCTCCGCTCCAACGGCCTAACCGGCGAGATCCCGGGCGATTTCTCAAACCTCACCCTCCTCCGCAACCTCTACCTCCAGAAGAACCGGTTCTCCGGTGAGTTCCCTCCGAGTCTGACTCGCCTCACTCGACTCACTCGCTTGGATCTCTCCTCCAACAACTTCACCGGCCAAATCCCTTTCTCCGTCAACAACTTAACCCACCTCACTGGCCTCTTCCTGGAACACAACAGCTTCTCCGGAAAAATCCCTAGCATCACTGCCAAGCTTGTCGACTTCAACGTTTCCTTCAACCGCCTCAACGGTTCCATTCCGGAGACGCTCTCCACTTTCCCCAACTCCTCATTCGCCGGAAACATAGATCTCTGTGGCCCGCCGTTGAAGGCCTGCAACCCCTTCTTTCCGGCTCCGGCGCCGTCTCCCTCCTCCAATTCAACCCCGACCAAGACGCATAAGTCCAAGAAGCTCTCCACGGGCGCCATTGTCGCAATCGTTGTCGGGTCCGTTCTAGTCGCGGCGTTGCTGCTGCTGCTGCTGTTGCTGTGCCTCCGGCGGCGGCGCCGGCAGCCAGCGAAACCGCCGAAGCCTGTGGCGGCGGCCCGTGCCGTGCCGGTGGAGGCGGGGACGTCGTCGTCGAAAGAGGATATCACCGGGGGTTCGGCGGAAGCGGAGAGGAACAAGCTGGTGTTCTTCGAAGGGGGGATATACAGTTTCGATTTGGAGGATTTGTTGAGGGCTTCGGCGGAGGTGTTGGGGAAGGGTAGCGTGGGGACTTCGTACAAGGCGGTGCTGGAGGAAGGTACGACGGTGGTGGTGAAGAGGCTGAAGGATGTTGTGGTGACGAAGAAAGAGTTCGAGTTGCAAATGGAGGTTCTGGGGAAGATTAAGCACGAGAATGTGGTTCCTCTCAGAGCCTTTTACTTCTCCAAGGACGAGAAATTGCTCGTTTACGATTACATGTCTGCCGGCAGCTTGTCTGCTCTCCTTCACGGGAGCAGAGGGTCTGGGAGAACACCACTGGACTGGGACAGCAGAATGAAAATAGCAGTAGGAGCGGCACGAGGGTTGGCATGCCTCCACGTGGCAGGCAAGGTGGTCCACGGCAACATAAAATCTTCCAACATCCTCCTCCGAGGGCCGGACCACGATGCCGGCGTTTCGGATTTTGGTCTAAATCCCCTGTTTGGGAACGGAGCCCCGTCAAACCGGGTGGCGGGTTACCGGGCACCCGAAGTGGTGGAAACTCGAAAGGTGAGCTTCAAGTCTGACGTGTACAGCTTTGGCGTCTTGCTGTTGGAGCTTCTAACGGGGAAAGCGCCGAATCAAGCGTCGCTGGGGGAGGAGGGAATCGACCTCCCGAGGTGGGTCCAGTCGGTGGTGCGCGAAGAGTGGACGGCGGAGGTGTTCGACGCGGAGCTCATGAGGTATCACAACATCGAGGAGGAGATGGTTCAGCTCTTGCAAATCGCCATGGCGTGTGTTTCGGTGGTGCCTGACCAGAGACCCAGCATGCAGGACGTGGTGCGCATGATCGAGGACATCAACCGGGGCGAGACCGACGACGGCTTGCGTCAGTCCTCCGATGACCCTTCTAAAGGATCCGAGGGTCACACTCCTCCCCCGGAGTCAAGGACACCTAGATCACTCACACCTTAA 1938 0.5862 MAPLTIIVFLLQLTSHVRVNSEPTQDKQALLAFLSQTPHSNRLQWNASASACDWVGVKCDASRSFVYSLRLPAVDLVGPIPPATIGRLSQLRILSLRSNGLTGEIPGDFSNLTLLRNLYLQKNRFSGEFPPSLTRLTRLTRLDLSSNNFTGQIPFSVNNLTHLTGLFLEHNSFSGKIPSITAKLVDFNVSFNRLNGSIPETLSTFPNSSFAGNIDLCGPPLKACNPFFPAPAPSPSSNSTPTKTHKSKKLSTGAIVAIVVGSVLVAALLLLLLLLCLRRRRRQPAKPPKPVAAARAVPVEAGTSSSKEDITGGSAEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFELQMEVLGKIKHENVVPLRAFYFSKDEKLLVYDYMSAGSLSALLHGSRGSGRTPLDWDSRMKIAVGAARGLACLHVAGKVVHGNIKSSNILLRGPDHDAGVSDFGLNPLFGNGAPSNRVAGYRAPEVVETRKVSFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMACVSVVPDQRPSMQDVVRMIEDINRGETDDGLRQSSDDPSKGSEGHTPPPESRTPRSLTP 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01515 645 CDD STKc_IRAK 345 608 - -
Phco8g01515 645 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Phco8g01515 645 ProSiteProfiles Protein kinase domain profile. 339 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01515 645 SUPERFAMILY L domain-like 25 207 - -
Phco8g01515 645 PANTHER OS05G0588300 PROTEIN 5 621 - -
Phco8g01515 645 FunFam Probable inactive receptor kinase RLK902 23 181 - -
Phco8g01515 645 Gene3D Ribonuclease Inhibitor 184 224 IPR032675 -
Phco8g01515 645 MobiDBLite consensus disorder prediction 607 625 - -
Phco8g01515 645 MobiDBLite consensus disorder prediction 607 645 - -
Phco8g01515 645 FunFam pollen receptor-like kinase 1 308 413 - -
Phco8g01515 645 Pfam Leucine rich repeat 80 125 IPR001611 GO:0005515
Phco8g01515 645 Gene3D Transferase(Phosphotransferase) domain 1 414 626 - -
Phco8g01515 645 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Phco8g01515 645 MobiDBLite consensus disorder prediction 287 312 - -
Phco8g01515 645 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 414 619 - -
Phco8g01515 645 SUPERFAMILY Protein kinase-like (PK-like) 343 608 IPR011009 -
Phco8g01515 645 Pfam Protein kinase domain 342 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01515 645 Gene3D Phosphorylase Kinase; domain 1 306 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01515 Phco-Chr8 15592907 15595964 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phco8g01515 Pkinase 3.5e-36 CL0016