Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01468 ATGGGAGCGCGTGGAAGAAGGCATCTGGTAAACGCGTTTGGGGCAGTGTGGGTTGCCCTAATCGGATGCGAGCGAGAACTGGTTCTCTTATCCTGTGAAACTGTCATCATAAATTCACATATCAGCCTCGGCCATGTCCTCCCTCGTGCACCTCCTCTTCCTTCCGCAACTACGAACTTCAATCGCGCCTTCTCGCCTATGGACATCATTGGCAAATCAAAGGAAGACGCTTCGCTTCCTAAAGCAACAATGACAAAAATTATTAAAGAAATGTTACCCCCAGATGTACGTGTTGCAAGAGATGCCCAAGATCTATTGATCGAGTGCTGTGTAGAGTTTATAAACCTCATCTCCTCAGAATCCAATGAAGTATGCAACAGAGAGGAAAAACGGACAATCGCACCTGAGCATGTATTGAAGGCTCTACAGGTTCTTGGATTTGGTGAGTACATCGAAGAAGTTTATGCAGCATATGAACAGCACAAGATGGAGACCATGCAGGACACTTTAAAGGGTGGTAAATGGAGCAATGGAACTGAGATGACCGAGGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTTGCAGAGGCACGTGCTAGAATGAATGGTGGAGCCATTGCTTCCAAGCAGCCAGATACTGACCAAAGTTTAGATAGTTAA 660 0.4606 MGARGRRHLVNAFGAVWVALIGCERELVLLSCETVIINSHISLGHVLPRAPPLPSATTNFNRAFSPMDIIGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCNREEKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKMETMQDTLKGGKWSNGTEMTEEEALAEQQRMFAEARARMNGGAIASKQPDTDQSLDS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01468 219 PANTHER PROTEIN DR1 HOMOLOG 65 218 IPR044255 -
Phco8g01468 219 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 77 142 IPR003958 -
Phco8g01468 219 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Phco8g01468 219 FunFam Negative cofactor 2 beta 69 206 - -
Phco8g01468 219 Gene3D Histone, subunit A 68 206 IPR009072 GO:0046982
Phco8g01468 219 SUPERFAMILY Histone-fold 75 206 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01468 Phco-Chr8 15124464 15128641 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phco8g01468 CBFD_NFYB_HMF 6.8e-22 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01468 8 15124464 15128641 Phco8g01468 8 15124464 15128641 ECH