Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01437 ATGCAGCAAATACACTCCATGGCACCAGGAACAGGAGGAGGAGGAGGACCCAGGTTTTTCTCCGCCACCGCCACCGCCGACAGGAGGCTCCGACCCCACCACCAGAACCAACAGGCCCTCAAGTGCCCCCGCTGTGACTCTCTCAACACCAAGTTCTGTTACTACAACAACTACAACCTCTCCCAGCCCCGCCACTTCTGCAAAAACTGCCGCCGCTACTGGACCAAAGGGGGCGTCCTCCGCAACGTCCCGGTCGGCGGTGGCTGCCGCAAATCCAAACGCTCCAACAAACCCGTCAAAACCTCCGACACCGCCCCCCCTCCCCCGCTGCCCGACCCCGACCATTCAAGCAGCGAGAGCTCGAGCCTTACCGCCGCTGCCGCGGAGCCAGTATCAGCGCCGATAAACTCCGATTCCACGAACGTGCAAGAGTCGAAGTTGTTGGTCCCCGTGGATCCTGTTTTGGAAACGAATCCTCTGGAGCAAGGAGCAGGGGACTGCGGTGGTATCTTCTCTGAGATTGGACCTTTCACCAGCCTGATCGCTACTTCAACTAACGAGCCATTGGCTTTCGGTTTCGGCAACGCTCTGCCCGATGCGTCGTCGTTTCAGTGGCAGCACTCGAAGGTGACCAGCAACCAGGAATTGAAGTTGCCCGAAAGCTCCTTCCTCGATCACACCGTTGATTTGTCGACTCTGCATGGTAAAACCAGCCACGGAACATTCGGATCGTTGGATTGGCAGGGCGGTGCGGATCAAGGTTTGTTTGATCTTCCTAACACCGTTGATCACGCTTACTGGAGTCACACTCACTGGTCTGACCACGACAATTCTTCTCTCTTTCATCTCCCCTGA 855 0.5719 MQQIHSMAPGTGGGGGPRFFSATATADRRLRPHHQNQQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNKPVKTSDTAPPPPLPDPDHSSSESSSLTAAAAEPVSAPINSDSTNVQESKLLVPVDPVLETNPLEQGAGDCGGIFSEIGPFTSLIATSTNEPLAFGFGNALPDASSFQWQHSKVTSNQELKLPESSFLDHTVDLSTLHGKTSHGTFGSLDWQGGADQGLFDLPNTVDHAYWSHTHWSDHDNSSLFHLP 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01437 284 MobiDBLite consensus disorder prediction 1 21 - -
Phco8g01437 284 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Phco8g01437 284 MobiDBLite consensus disorder prediction 115 140 - -
Phco8g01437 284 MobiDBLite consensus disorder prediction 85 140 - -
Phco8g01437 284 Pfam Dof domain, zinc finger 38 94 IPR003851 GO:0003677|GO:0006355
Phco8g01437 284 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 29 204 IPR045174 GO:0003700|GO:0006355
Phco8g01437 284 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01437 Phco-Chr8 14859221 14860075 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco8g01437 zf-Dof 2.5e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01437 8 14859221 14860075 Phco7g02434 7 42492818 42493756 PCT