Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01420 ATGAATGAAAGTTCAAGTAAAGTTCAGCTAGCCAATCAACAAGAGGGTGAGAACATTAAAACTGAGAAATTCTCAAAGGCACCCTCCACCTCAAGATCATGGTCAACATTCAGAAACCCAAGAATTGTACGAGTGTCACGTTCTTTGGGAGGAAAAGATAGGCACAGCAAGGTTTGCACCATTAGGGGACTGAGGGACCGAAGGATTAGACTGTCTGTACCCACAGCAATCCAGTTATATGATCTTCAAGAAAAGCTTGGACTCAACCAACCTAGCAAGGTAGTAGATTGGTTGCTTGAAGTCACCAAATCTGATATTGATAAACTCCCACCACTTCAATTTCCTCACTGTTTTACCCAGTTTCACCAACAAACTCCACTGTCAGGTACCTCTCAGTTCTCTCTTGGAAGCTTGTATGATGGTGTTAATTCCACCTTTATAAAGGATGGGGGAAATAAAAACCTCATGGTAAGGTCAACAAAGTATTGGGATATAGATTCACAAAACCGTACGGAGTTAGCTGAAAATGTCTCAACCTCCCAGAAGGGCAAGTTCTGGACCAAACCAAATGAACTAGAAAATCATCAAAATGGAATTGGTGGTAGTACTCGTAATAGAGAAGAATCTTCAGCTCATTGTAAGCTCTTCCCCCTTGGAACTAATAGCTCTTATTTACCTGGTTTGTCAAACAATGCCATGACACATAACTCCTACCACCATTCTGAGCCTTCAAGTCTATCTTTATCCCACCTTGGAAGCCATGGATTATTTCCGTCCCATTCAAGCAGTGGCAGTGGTGTGCAATTTTCATCTTCTAATTTCTATGGAGCATCTGGTCCCCAATTACTTTTTTGTCCACCTTCTGCTACACCATCTGCTTTTTACTCGGTGGAAACTGATCCAAGACAATCCAACAATGTTCAGATCTTTAGCTCAAGTTCCCAAGTCATGATGCCTCATCCTCTCATCCAATCTATTCATTCCACCAGTTCACCTCTTAGACGCCTTCCAACATCATTAAGCTCCAAGCTTTTTGATTCAGATAATAATGATCGTAGCCAACAAGGTAAGGGTGGTACTTGTTCTTGA 1089 0.4169 MNESSSKVQLANQQEGENIKTEKFSKAPSTSRSWSTFRNPRIVRVSRSLGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQEKLGLNQPSKVVDWLLEVTKSDIDKLPPLQFPHCFTQFHQQTPLSGTSQFSLGSLYDGVNSTFIKDGGNKNLMVRSTKYWDIDSQNRTELAENVSTSQKGKFWTKPNELENHQNGIGGSTRNREESSAHCKLFPLGTNSSYLPGLSNNAMTHNSYHHSEPSSLSLSHLGSHGLFPSHSSSGSGVQFSSSNFYGASGPQLLFCPPSATPSAFYSVETDPRQSNNVQIFSSSSQVMMPHPLIQSIHSTSSPLRRLPTSLSSKLFDSDNNDRSQQGKGGTCS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01420 362 Pfam TCP family transcription factor 51 184 IPR017887 -
Phco8g01420 362 MobiDBLite consensus disorder prediction 327 362 - -
Phco8g01420 362 ProSiteProfiles TCP domain profile. 51 109 IPR017887 -
Phco8g01420 362 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 348 IPR005333 GO:0003700
Phco8g01420 362 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01420 Phco-Chr8 14657995 14659083 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phco8g01420 TCP 1.3e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01420 8 14657995 14659083 Phco7g02417 7 42253259 42254380 PCT