Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01381 ATGTCAGAGCAGGAAACTCATTCTTGTGGCTTACTCTTGTTCTTTTTCTTGCTCCTTCTTTCAGGTAACGTTGTTGTAGGGGAATCTTTGGAAACAGACAAAGAGCTTCTGCTGAGGCTGAAATCGTACCTGGACAGCAAAACTCTTGCAGACAAAGGAGCGTACATAAACTGGAACACCAGTACCTCCAATCCTTGTGAATGGAGTGGAATTTCATGCAGTGCTACGGGGAGGGTGGTTCGCATAGGCCTTTCTCGGAGTGATATCACTGGTGAGATATTCAAGAATTTCTCGCAGCTCACTGAACTCGTGCACCTTGATCTCTCTCAGAACACGCTCTCTGGTGAGATTCCTGAGGACTTGAGGCGCTGCCACAAGCTCGTGCATCTCAACCTATCACATAATATTCTTGAAGGGGAGCTGAACTTGACTGGATTGACAAGCTTGCACACACTGGACTTGTCAAATAACAGATTTTTTGGGGATATTGGATTGAATTTCCCTGCCATCTGTGACAATTTAGTCACTCTGAACGTCTCAGGTAATAATAACTTGACTGGCAGGATTGAAAACTGCTTTGATCAATGTCTCATGTTGCAGTACTTGGATTTGAGCACCAACAATCTGAGTGGCAGCTTGTGGATGAAGTTTGCCAGGCTCACAATGTTTTCTGTCGCGGAGAACCATCTAAGTGGGACTATTCCTTTGGAAGCTTTGCCTTTGAATTGTAGCCTTCAAGAACTAGACCTTTCGCAAAATGGATTTGTTGGTGAGGCACCTAAGGGGTTTGCTAACTGCAAGAATTTAAGCAGTCTGAATCTTTCTAGTAACAAATTTACGGGGGGTATTCCTGTTGAGATAGGATCCATTTCGCAGCTCAAAGCATTGTACTTGGGGAACAACAGCTTTTCAAGAGAGATTCCCGAGTCCCTTCTGAACTTAACCAATTTGACCTTCTTGGATTTGAGCAGAAACCGATTTGGTGGGGAAATACAAGAGATATTCGGAAAATTTAAGCAAGTGAGTTTTCTTCTGTTGCACTCAAATAATTACACTGGAGGATTGAGATCCTCAGGAATTCTCACATTGCCAAACATTTGGCGGTTAGACCTAAGCTACAACAACTTTTCAGGTCCGTTACCAGTTGAGATCTCTCAAATGTCAAGTCTGAAGTTTCTAATGTTATGCTACAACCAGTTCAATGGATCCATTCCACCGGAATTTGGAAACATGACTCAACTGCAAGCGCTTGACCTTGCCTTCAACAATTTGAGTGGGTCTATACCACCAACCCTTGGAAACTTGAACTCCCTCTTATGGTTGATGCTCGCAAACAATTCTTTAACTGGAAAAATCCCTCCAGAGTTGGGAAACTGTTCAAGCTTGTTATGGCTAAACCTTGCCAACAATAAGCTCTCTGGAAAATTGCCTTCTGAACTGTCCAAAATTGGAAGGAATGCAATGGCCACATTCGAATCCAATAGGAAAAACTATAGAATGGTTGCTGGATCTGGTGAATGTTTGGCAATGAGGAGATGGATACCTGCAGATTACCCTCCATTCAGCTTTGTGTATAGCCTTTTAACAAGGAAAAAATGTAGAGAACTTTGGGACAAACTGATCAAAGGGTATGGTGTTTTCCCGTTTTGTGAACCTGGTTCTTCCTTTCGTGTAACACAGATATCCGGGTATATTCAGCTAAGTTCGAACCAGCTCAGTGGTGAAATTCCTCCGGAGATTGGGTCAATGGTCAACTTCAGCATGATGCACTTGGGGTTCAACAATCTCTCTGGGAAGTTACCTCGAGAGATAGGAAGTATTTCCATGGTGGTATTAAACATCACAAGAAACGAGTTTTCAGGCGAAATTCCCCAAGAAATTGGCAACATGAAATGCCTGATGAATCTGGATCTGTCATACAACAATTTCTCGGGAATGTTTCCAACGAATTTGAACAAATTGACAGAGCTTAGCAAGTTCAACATCTCATACAATCCCTTCATATCAGGTGAGGTCCCATCAAACGGACAGTTCGCTACCTTTGAAGAAAATTCATATTTAGGCAACCCCCTTTTGATCCTACCCCAGTTTATTCAGAACACTACCAAAGATAGAAACACCACCTCTCAGAAAGACCATAAAAAGTCCTCGAGAGTGTCTGTGTTTTTGGTGTTTGCGGTTATAACACTGGTTTTCATAGTATGTGGACTTCTCACTATCTTAGTCTGCGTATCGGTGAAAGGCCCTTCAGATGAACCGAGATACCTCTTGAGAGACACAAAACAATGGCATGATTCCAGCAGCTCGGGATCCTCACCATGGATGTCCGACACAGTGAAGGTCATCCGTTTGAACAAGACAGCTTTCACACATGCCGACATTCTGAAAGCAACTAGCAGCTTCTCAGAGGACAGAATCATAGGAAAAGGAGGGTTTGGAACAGTGTACAAGGGAGTGTTTTCAGATGGCAGACAAGTGGCAGTGAAGAAGCTCCAAAGGGAAGGCCTGGAGGGTGAGAAGGAATTCAAGGCTGAAATGGAGGTTCTGAGTGGTCGTGGCTTTGGTTGGCCTCATCCAAACCTGGTCACACTCTACGGGTGGTGCCTAAACGACTCAGAAAAGATACTAATTTATGAGTACATAGAGGGTGGAAGCTTGGAGGATGTAGTGACTGACAGAACACGTTTGACATGGAGGAGGAGGCTAGAAGTGGCAATTGATGTGGCACGTGCACTAGTGTATCTACACCACGAGTGCTACCCTTCTGTTGTGCACAGAGATGTGAAGGCTAGCAATGTGTTACTAGATAAAGATGGGAAGGCCAAAGTAACTGATTTTGGGCTTGCGAGAGTGGTTGATGTTGGGGATAGCCATGTGAGCACTATGGTGGCTGGGACAGTGGGGTATGTTGCACCTGAATATGGACACACATGGCAGGCTACTACAAAAGGGGATGTGTACAGTTTTGGGGTGTTGATTATGGAGCTTGCAGCAGCAAGAAGAGCAGTGGATGGAGGGGAAGAGTGCTTGGTGGAATGGGCTAGGCGTGTTATGGGTTATGGACGACACCGTCATAATAATCATCATGGGTTGAATCGTTCTGTGCCAGTTTTGGTGATGGGTTCTGGGCTTGTTGGTGGAGCTGAGGAGATGAGTGAGTTGCTGAGGATTGGGGTGATGTGCACAGCTGATGCACCACAGGCTAGGCCTAACATGAAAGAGGTTCTTGCTATGCTGATTAAGATATTTAACCCCATTGGTTACTCCAGTTATGGATACCTTGTTTAG 3288 0.4443 MSEQETHSCGLLLFFFLLLLSGNVVVGESLETDKELLLRLKSYLDSKTLADKGAYINWNTSTSNPCEWSGISCSATGRVVRIGLSRSDITGEIFKNFSQLTELVHLDLSQNTLSGEIPEDLRRCHKLVHLNLSHNILEGELNLTGLTSLHTLDLSNNRFFGDIGLNFPAICDNLVTLNVSGNNNLTGRIENCFDQCLMLQYLDLSTNNLSGSLWMKFARLTMFSVAENHLSGTIPLEALPLNCSLQELDLSQNGFVGEAPKGFANCKNLSSLNLSSNKFTGGIPVEIGSISQLKALYLGNNSFSREIPESLLNLTNLTFLDLSRNRFGGEIQEIFGKFKQVSFLLLHSNNYTGGLRSSGILTLPNIWRLDLSYNNFSGPLPVEISQMSSLKFLMLCYNQFNGSIPPEFGNMTQLQALDLAFNNLSGSIPPTLGNLNSLLWLMLANNSLTGKIPPELGNCSSLLWLNLANNKLSGKLPSELSKIGRNAMATFESNRKNYRMVAGSGECLAMRRWIPADYPPFSFVYSLLTRKKCRELWDKLIKGYGVFPFCEPGSSFRVTQISGYIQLSSNQLSGEIPPEIGSMVNFSMMHLGFNNLSGKLPREIGSISMVVLNITRNEFSGEIPQEIGNMKCLMNLDLSYNNFSGMFPTNLNKLTELSKFNISYNPFISGEVPSNGQFATFEENSYLGNPLLILPQFIQNTTKDRNTTSQKDHKKSSRVSVFLVFAVITLVFIVCGLLTILVCVSVKGPSDEPRYLLRDTKQWHDSSSSGSSPWMSDTVKVIRLNKTAFTHADILKATSSFSEDRIIGKGGFGTVYKGVFSDGRQVAVKKLQREGLEGEKEFKAEMEVLSGRGFGWPHPNLVTLYGWCLNDSEKILIYEYIEGGSLEDVVTDRTRLTWRRRLEVAIDVARALVYLHHECYPSVVHRDVKASNVLLDKDGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWQATTKGDVYSFGVLIMELAAARRAVDGGEECLVEWARRVMGYGRHRHNNHHGLNRSVPVLVMGSGLVGGAEEMSELLRIGVMCTADAPQARPNMKEVLAMLIKIFNPIGYSSYGYLV 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01381 1095 CDD STKc_IRAK 807 1082 - -
Phco8g01381 1095 PRINTS Leucine-rich repeat signature 199 212 - -
Phco8g01381 1095 PRINTS Leucine-rich repeat signature 314 327 - -
Phco8g01381 1095 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 881 1086 - -
Phco8g01381 1095 Gene3D Phosphorylase Kinase; domain 1 766 880 - -
Phco8g01381 1095 ProSiteProfiles Protein kinase domain profile. 801 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01381 1095 SMART LRR_typ_2 146 177 IPR003591 -
Phco8g01381 1095 SMART LRR_typ_2 387 410 IPR003591 -
Phco8g01381 1095 SMART LRR_typ_2 314 337 IPR003591 -
Phco8g01381 1095 SMART LRR_typ_2 435 459 IPR003591 -
Phco8g01381 1095 SMART LRR_typ_2 100 124 IPR003591 -
Phco8g01381 1095 SMART LRR_typ_2 411 434 IPR003591 -
Phco8g01381 1095 Gene3D Ribonuclease Inhibitor 559 710 IPR032675 -
Phco8g01381 1095 SUPERFAMILY L domain-like 51 235 - -
Phco8g01381 1095 Pfam Leucine rich repeat 244 302 IPR001611 GO:0005515
Phco8g01381 1095 Pfam Leucine rich repeat 87 135 IPR001611 GO:0005515
Phco8g01381 1095 SUPERFAMILY Protein kinase-like (PK-like) 783 1080 IPR011009 -
Phco8g01381 1095 Gene3D Ribonuclease Inhibitor 29 183 IPR032675 -
Phco8g01381 1095 Gene3D Ribonuclease Inhibitor 358 500 IPR032675 -
Phco8g01381 1095 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 237 331 - -
Phco8g01381 1095 Pfam Leucine Rich repeat 314 330 IPR001611 GO:0005515
Phco8g01381 1095 Pfam Leucine Rich repeat 147 165 IPR001611 GO:0005515
Phco8g01381 1095 Pfam Protein kinase domain 802 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01381 1095 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
Phco8g01381 1095 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 81 236 - -
Phco8g01381 1095 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Phco8g01381 1095 ProSitePatterns Protein kinases ATP-binding region signature. 807 830 IPR017441 GO:0005524
Phco8g01381 1095 SUPERFAMILY L domain-like 182 477 - -
Phco8g01381 1095 FunFam Nuclear pore complex protein NUP107 30 191 - -
Phco8g01381 1095 SMART serkin_6 801 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01381 1095 Gene3D Transferase(Phosphotransferase) domain 1 881 1086 - -
Phco8g01381 1095 FunFam Putative LRR receptor-like serine/threonine-protein kinase 338 499 - -
Phco8g01381 1095 Gene3D Ribonuclease Inhibitor 198 357 IPR032675 -
Phco8g01381 1095 FunFam Suppressor of npr1-1 constitutive 4 770 880 - -
Phco8g01381 1095 SUPERFAMILY L domain-like 554 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01381 Phco-Chr8 14333135 14336578 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Phco8g01381 Pkinase 1.8e-44 CL0016