Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01377 ATGGGGTGTGTGGTGGTGAAGCAGGCAGTTTCTGTCACGCCTGCAATTGAGCACTCGGTTGAGTCGGATAAGAACAGGAAGAATAAGACTGAGTCAGGTAGGAGCGAGTTGGGTGAGTCAGGGAGAGCGAGTTCCAATGGTGGAAGTGAGTCTCTGAGCTTCAGGTTGGGGAACCTGAGCAAGTACGTGGAGGGAGAGCAAGCGGCGGCGGGTTGGCCGGCGTGGCTCAGCGCCGTCGCAAGTGAGGCTATTCACGGTTGGGTCCCTCTTCGAGCTGACGCATTTGAGAAACTTGAAAAGATTGGCCAGGGAACATATAGTAGTGTTTTCCGAGCAAAGGAGATTGAGACTGGGAAGATAGTAGCTTTGAAGAAGGTGAGATTTGACAATTTTGAGCCAGAGAGTGTGAGGTTTATGGCACGAGAAATAATGATTCTTAGGAGGCTTGATCATCCAAACATCATTAAACTGGAGGGCTTGATTACTTCTAGATTGTCTTGTAGCATATATCTTGTGTTTGAGTACATGGAGCACGACATCACTGGGCTCTTGTCTAGACCAGAAATCAAGTTTAGTGAATCACAGATCAAATGCTACATGAAACAGTTGTTATCTGGTCTTGAGCACTGTCACTCACGGGGTGTGATGCACCGGGACATCAAAGGATCGAATCTTTTAGTGAATAATGAAGGAATATTGAAGGTGGCAGATTTTGGACTGGCAAATTTCTCTAATTCTGGGAACAAGCAGCCCCTCACTAGTCGTGTAGTCACGTTATGGTACCGTCCTCCAGAACTTTTGCTCGGTTCAACAGATTATGGTCCATCCGTGGATCTCTGGAGTGTTGGCTGTGTATTTGCAGAATTACTGATTGGGAAGCCTATACTTCAGGGGAGAACCGAGGTTGAACAATTGCACAAAATTTTCAAGCTTTGTGGCTCCCCACCCGAAGAATACTGGAAAAAGACCAGACTTCCTCATGCAACATTGTTCAAGCCGCAACAACCATATGATAGTTGCCTCCGAGAGACATTTAAAGATTTTCATGTATCCAGTGTAAATCTTCTACAAACTCTTCTTTCTGTTGAACCAACCAAACGTGGGACTGCCTCCTCTGCTCTTACATTAGAGTATTTCAAAACAAAACCTTATGCATGCGACCCATCAAGCTTACCAAGATACCCACCTAGCAAGGAGATTGATGCGAAACATGAAGAGGAGTCAAGAAGGAAAAAAATTGGTGGGCGTGCTGGTGGACCAGAATCAAGAAAACCATCAAGAAAGCCACTAGCACTGAGTAAATTAGCCCCAGCAGAGGATTTGACAACTAAAACTCAAACTTCCCGAAAGATGGTTGATAGATGTGTCCACACCCTTAAAGAAGAGAACACTAATACAGGTGAGGAGGCACCAAAGCAGTGTAGTGGTAAACCAGACGATGCTTCCCCTGTGAAGAATGCGTCTCAAATAGATATTCCCTTTCCTGGACCATTGCAAGTTTCAAAATCAAGTGGCTTTGCATGGGCAAAAAGGCGTAGAGATGACACTTCAATTAGAACTCACAGTCGGTCTATTTCTCGAGGATATATCTTTAACTCATTGGAAACTTCTACACTAAATTCAAGGAATAATTCTGAATCCAGAAACTATGAAAATAATGATTTTTTCGGCACATGCACCAACTCTAGGGGCCATGATCTACTTGAAATTTCTAAGCTTGCCATGAAAAATCAATGGAGTAAGTTTGATCGTCCAGATTCATTTGATACTGATGAGTACCATTCACAAGAACTGTCCATGGCGCTTTATAACAGGCAAGATTCACTATCCAAGAGAAGTAACCTGAGTTACCAGGATCAAGGAGAAAAGGTAGAGTTTTCAGGGCCTCTACTATCTAAAATGCACACCGTTGATGAGCTCTTAGAAAGACATGAGCGTCACATCCGGCGTACTGTAAGAAGATCATGGTTTCAGAAAGGTAAGAAGCAAGGGAAGTAA 1998 0.4404 MGCVVVKQAVSVTPAIEHSVESDKNRKNKTESGRSELGESGRASSNGGSESLSFRLGNLSKYVEGEQAAAGWPAWLSAVASEAIHGWVPLRADAFEKLEKIGQGTYSSVFRAKEIETGKIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDITGLLSRPEIKFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLANFSNSGNKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPEEYWKKTRLPHATLFKPQQPYDSCLRETFKDFHVSSVNLLQTLLSVEPTKRGTASSALTLEYFKTKPYACDPSSLPRYPPSKEIDAKHEEESRRKKIGGRAGGPESRKPSRKPLALSKLAPAEDLTTKTQTSRKMVDRCVHTLKEENTNTGEEAPKQCSGKPDDASPVKNASQIDIPFPGPLQVSKSSGFAWAKRRRDDTSIRTHSRSISRGYIFNSLETSTLNSRNNSESRNYENNDFFGTCTNSRGHDLLEISKLAMKNQWSKFDRPDSFDTDEYHSQELSMALYNRQDSLSKRSNLSYQDQGEKVEFSGPLLSKMHTVDELLERHERHIRRTVRRSWFQKGKKQGK 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01377 665 Pfam Protein kinase domain 95 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01377 665 Gene3D Phosphorylase Kinase; domain 1 82 177 - -
Phco8g01377 665 SMART serkin_6 95 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01377 665 Gene3D Transferase(Phosphotransferase) domain 1 178 417 - -
Phco8g01377 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Phco8g01377 665 ProSiteProfiles Protein kinase domain profile. 95 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01377 665 FunFam probable serine/threonine-protein kinase At1g54610 82 177 - -
Phco8g01377 665 MobiDBLite consensus disorder prediction 17 50 - -
Phco8g01377 665 MobiDBLite consensus disorder prediction 389 484 - -
Phco8g01377 665 MobiDBLite consensus disorder prediction 397 423 - -
Phco8g01377 665 FunFam probable serine/threonine-protein kinase At1g54610 178 417 - -
Phco8g01377 665 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Phco8g01377 665 PANTHER CELL DIVISION PROTEIN KINASE 93 383 - -
Phco8g01377 665 MobiDBLite consensus disorder prediction 19 36 - -
Phco8g01377 665 CDD STKc_CDK9_like 95 379 - -
Phco8g01377 665 SUPERFAMILY Protein kinase-like (PK-like) 88 386 IPR011009 -
Phco8g01377 665 MobiDBLite consensus disorder prediction 446 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01377 Phco-Chr8 14278263 14283305 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phco8g01377 Pkinase 1.1e-68 CL0016