Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01372 ATGGGCGTAGACAACAAAGGAATCAGACTCATATTCATTTTCATTCTTCACCCTTTCCTTTTCACCCTCCCCAAATGCAACTCTTCTTTCACACCTCTCGTTAACTATCTCCTTGATTGTGGCTCCTCCCACCCCACTCAGCTCACAGATGGACGAACTTTCAAATCTGATCGTGAAACCACTTCTCTCCTAGCCACAGCTGAAGATGTGCAAATATCACTTGACTCAAACCTCTCATCTTCTGTTCCTTCTTCATTACTTCCTTTGTATCAAACTGCAAGAGTTTTTCTAGAGGAATCCACCTACTCCTTTTACATATCTAAAACTGGTAGACTTTGGGTTCGTCTTTACTTCTTTCCTCTCTCTAACCCTTCATATAACCTAACAACTGCTGTTTTCTCTGTCCAAACTAATCACCATGTGCTCCTGCATGAGTTCTCCGTGAGGAACAGTGACTCACCTGTTTTCAAGGAATACCTTGTTAACGTTTCTGATAGTAGATTCTCCCTCAAATTCAAGCCCATGAAAAGCTCCTTTGCGTTCATCAATGCAATTGAGGTTGTCTCAGCCCCTGACAATCTTATTTCGGATTCAGCAACTGCACTTTCCCCACTTCGTGAATTCAAAGGCTTGTTGATATCTGCTTTTGAAGTATCCTACAGAATAAACGTTGGTGGTCCCACCATAACTCCTGACGACGACACTTTGGCAAGAACATGGGAAACTGATGGTTCATACAACATCTTCCCACAGGGTTCTGAGACTCTTTCTGTCTCCAAAAAAAGCATAAAGTATCCTCATACTGGGGTTACACCTTTGATTGCTCCCAACTTGGTTTATGCAAGTGTTGTACACATGAAGGACGCTAGAGTCATGCGACCGAATTTCAATCTCAGTTGGATGGTGAACGTGGAAAGGAGCTACTCTTATTTGATAAGAATGCATTTCTGTGACATTTTGAGCAAGAGTCTTAATCAGTTATACTTTAATGTGTACATCAACGGGATTGAGGGTGTGTCAGCTCTGAATCTATCATCGCAAACCAAAGCTCTAGCCACTGCTTTTTACCAGGACTATGTGTTAAATGCACTGGATATAACAAACGGTTCCATTTTGGTTCAGGTGGGACCAACCAATCTCCAACAAGGCACGGTCGATGCAATTCTGAATGGAATTGAGGTAATGAAGATTAGCAACATCGCCGACAGCTTGGATGGTTTCTTCTCTGTTGATGAGAAATACAAAGGGCCAAGTTCAATAACCACGGAAATGAAAATTTTGGTTTATGTTGGACTTGTATTGGCTGTGACAGCAATGCTGTTGCTAGTAATGATTTGCATGAGGTGGAAAAAGAGGCCTCAGGGTTGGGAAAAGCATAGCAGGTTCTCATCATGGCTCCTCCCTGTCCATTCACCTACAGTGTGTTCAAGCAAAAGCAGTTGGCGAGGCTCAACAGCATCCAGTTCCCACAAGAGCACTAAACATGGCAAAAGGTTCTTCCCCTTCAGTGAGATGCGAGAAGCCACCAATAATTTCGACGAGACTAGAGTGATTGGTGTTGGAGGCTTCGGGAAAGTGTATCTTGGAACGTTGAAAGATGGGACAAAGGTTGCCATAAAACGAGGAAGTGGTAATTCAGAACAAGGCATCAATGAGTTCAGAACAGAACTAGAAATGCTCTCAAAGCTACGCCATCGCCACCTTGTCTCATTGATGGGCTTCTGTGATGAAAACTCAGAGATGGTTCTTGTGTACGAGTACATGGCCAATGGCCCTTTTCGTTCCCACCTCTATGGCTTCGACCTCCCTTGTTTGTCATGGAAAAAGAGGCTTGAAATATGCATTGGTGCAGCTCGCGGCTTGCACTATCTCCACACCGGGGCAGCTCAAAGCATCACACACCGTGATGTGAAGACAACAAACATCCTCTTAGATGAGAATTATATTGCCAAGGTTTCTGACTTTGGTTTGTCAAAAGCTGTCCCAGAGAAAGCCCAGGTTAGCACAGCCGTAAAGGGTAGTTTTGGGTACCTTGACCCTGAGTACTATAGGAGTCAGCAACTAACTCAGAAATCTGATATATACTCTTTTGGGGTAGTCCTATTTGAGGTACTATGTGCTAGGCCAGTTATTTGCCCAACACGTCCAACAGAAGAGATTAACTTGGCTGAATGGGCAAAGAAACAGCACAGAAGAGGAGTGCTCAATGAAGTAATTGATCCACATATTGCTGTTACTATGAATCCTGAATCGCTAAGTGTTTTTGTTCAAATTTCTGAGAGATGTTTAGCAGATTGTGGTGTTGATAGGCCTAGCATGGGGGATGTGTTGTGGCATTTGGAATACGCTTTGCGCCTAGAAGAAGCTGCCTCACGGATTGATGAACCTGAAGATAAAAGTGCAAGTATAGTCACAAATGAGGATAATTCTGTTTTGTTTTCTGAGATAAACAACTTAGAGGAAAGGTAA 2469 0.4322 MGVDNKGIRLIFIFILHPFLFTLPKCNSSFTPLVNYLLDCGSSHPTQLTDGRTFKSDRETTSLLATAEDVQISLDSNLSSSVPSSLLPLYQTARVFLEESTYSFYISKTGRLWVRLYFFPLSNPSYNLTTAVFSVQTNHHVLLHEFSVRNSDSPVFKEYLVNVSDSRFSLKFKPMKSSFAFINAIEVVSAPDNLISDSATALSPLREFKGLLISAFEVSYRINVGGPTITPDDDTLARTWETDGSYNIFPQGSETLSVSKKSIKYPHTGVTPLIAPNLVYASVVHMKDARVMRPNFNLSWMVNVERSYSYLIRMHFCDILSKSLNQLYFNVYINGIEGVSALNLSSQTKALATAFYQDYVLNALDITNGSILVQVGPTNLQQGTVDAILNGIEVMKISNIADSLDGFFSVDEKYKGPSSITTEMKILVYVGLVLAVTAMLLLVMICMRWKKRPQGWEKHSRFSSWLLPVHSPTVCSSKSSWRGSTASSSHKSTKHGKRFFPFSEMREATNNFDETRVIGVGGFGKVYLGTLKDGTKVAIKRGSGNSEQGINEFRTELEMLSKLRHRHLVSLMGFCDENSEMVLVYEYMANGPFRSHLYGFDLPCLSWKKRLEICIGAARGLHYLHTGAAQSITHRDVKTTNILLDENYIAKVSDFGLSKAVPEKAQVSTAVKGSFGYLDPEYYRSQQLTQKSDIYSFGVVLFEVLCARPVICPTRPTEEINLAEWAKKQHRRGVLNEVIDPHIAVTMNPESLSVFVQISERCLADCGVDRPSMGDVLWHLEYALRLEEAASRIDEPEDKSASIVTNEDNSVLFSEINNLEER 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01372 822 PANTHER OS07G0166700 PROTEIN 498 787 IPR045272 GO:0004714|GO:0006468
Phco8g01372 822 CDD STKc_IRAK 518 781 - -
Phco8g01372 822 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Phco8g01372 822 ProSiteProfiles Protein kinase domain profile. 512 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01372 822 Gene3D - 33 191 - -
Phco8g01372 822 Gene3D - 215 399 - -
Phco8g01372 822 SMART serkin_6 512 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01372 822 Gene3D Transferase(Phosphotransferase) domain 1 588 809 - -
Phco8g01372 822 Pfam Protein tyrosine and serine/threonine kinase 515 722 IPR001245 GO:0004672|GO:0006468
Phco8g01372 822 FunFam Receptor-like protein kinase FERONIA 588 802 - -
Phco8g01372 822 SUPERFAMILY Protein kinase-like (PK-like) 487 782 IPR011009 -
Phco8g01372 822 FunFam Putative receptor-like protein kinase 35 191 - -
Phco8g01372 822 Gene3D Phosphorylase Kinase; domain 1 473 587 - -
Phco8g01372 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Phco8g01372 822 FunFam receptor-like protein kinase FERONIA 476 587 - -
Phco8g01372 822 FunFam Receptor-like protein kinase FERONIA 215 399 - -
Phco8g01372 822 Pfam Malectin-like domain 38 397 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01372 Phco-Chr8 14207253 14209721 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco8g01372 Malectin_like 1.5e-35 CL0202