Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01352 ATGGAAAATCTTTCGCTGCTTTCTAAGGAAGACCATCACATGGATTTGCCTCCGGGATTTCGCTTCCACCCCACTGATGAAGAGCTTATAACCCATTACCTCTACAAGAAGGTTATTGACACCAACTTCTGCGCTAGGGCCATTGGAGAAGTCGACCTCAACAAGTCTGAGCCTTGGGATTTGCCATGGAAAGCCAAAATGGGAGAGAAGGAGTGGTACTTTTTCTGTGTCAGAGACAGAAAATACCCCACTGGTTTGAGAACCAACCGGGCCACTGAAGCCGGTTACTGGAAAGCCACGGGGAAAGACAAAGAGATTTTCAGAGGAAAATCTTTGGTCGGAATGAAAAAAACTCTCGTTTTCTACCGAGGTCGAGCACCCAAAGGAGAGAAAAGCAACTGGGTCATGCACGAGTACAGACTTGAGGGAAAATTCTCTGTTCACAACCTCCCCAAAACTGCAAAGAACGAGTGGGTGATCTGCAGGGTGTTTCAGAAAAGTTCTGCGGGGAAGAAAACTCATATTTCGGGGATAATGAGGTTGGACTCTTTTGCCAATGAATTGGGTTCTTCTGCTCTACCACCCCTTTCGGATTCTTCGCCTTCTATTGGCAACACTAAACCGCTCAATGAATCGGCTTACGTGCCCTGCTTCTCCAATCCAATTGATGTTCAAAGAAACCAAGAAGGGGTCTTTGATTCCCTCAACAACTCTATCTATGGGGTTTCTTCAAATCCCTTGGACTTTCTTCCCAGAATGCCACCTTCTGCCTCGTTCTACTCCACTCAAGCTGTTCAATCTGTGCCTAATTTGACATTTCCCGGTTCTGTTTACACTCTGCAGGACCACACCATTCTGAGAGCCATGTGTGAAAACAATGGTAATGATTACAAGTCAGAGAGGGACATGATCAGTGTTTCACAGGAAACGGGTCTTACAACTGATATCAACCCTGAAACCTCTTCAAATTTTGATATGGGTAGGAGGCACTTTGACAATCACAATCATCCTTCTGTTTCTGTTTCTGTTGCTCCATTGGATCTTGATGCGTATCTTGTTGATCTTGCCTTTCTGGTTTGGATCAGTATAGTCCAGCTAATACTGAGACCAAGACCAAGACCAAGAGCTTGA 1131 0.4527 MENLSLLSKEDHHMDLPPGFRFHPTDEELITHYLYKKVIDTNFCARAIGEVDLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFRGKSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKSSAGKKTHISGIMRLDSFANELGSSALPPLSDSSPSIGNTKPLNESAYVPCFSNPIDVQRNQEGVFDSLNNSIYGVSSNPLDFLPRMPPSASFYSTQAVQSVPNLTFPGSVYTLQDHTILRAMCENNGNDYKSERDMISVSQETGLTTDINPETSSNFDMGRRHFDNHNHPSVSVSVAPLDLDAYLVDLAFLVWISIVQLILRPRPRPRA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01352 376 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Phco8g01352 376 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Phco8g01352 376 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 256 - -
Phco8g01352 376 FunFam NAC domain-containing protein 100-like 25 170 - -
Phco8g01352 376 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Phco8g01352 376 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01352 Phco-Chr8 14089478 14091145 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco8g01352 NAM 2.5e-39 No_clan