Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01341 ATGGAGTCTCATCCTCTTATGGGTTGGAGCTCTTATTATCAAATAGAAGAAAATCCATTTCCATTTACGGGCCATTTTTCTTACAGCGAAATCTCTGGAGTGTATCCTCCACTACACGATATAGCCATACAAGACTACCACTATGATGCTGTTCCTCTTATGGAGTATTACCCTTCAGTTCCTTTATATGAAACACTCGCCATCGAACCAACACCAAGCCTGCGAGCAGACTACGATTTCTATGATATTAATAAGGGGCTTTCTGTGTGGAACGAAGTGGATGCTGTGTTTGATTCGGAAGTCGGTTTTTTATTTCGTAACAACGAAGAACGTGGAGGAGGTTTGAAGGAAATGATGGAGAATAAGCAAGGGAGAGAAGAGAGAACGAACTCTAGCAGCAGCAGAATGTTATCAAGGAAGACCATATCTCAGTACTTTTACATGCCAATAACACAAGCTGCCAGAGAACTTAATGTGGGGCTGACACTATTGAAGAAAAGGTGCAGAGAGTTGGGTATAAGAAGGTGGCCCCACAGGAAGCTGATGAGCTTGCAAACTCTGATAAATAATGTGCAGGAGCTTCTGAAAGAGGAGGGGCCAGAGAGTGAAGAGAAGTTGAAATATGCCATTGAGACATTGGAAAGTGAAAAGAAGCTTTTGGAGGAAATGCCAGACATTGAACTGGAAGATAATACAAAAAGGCTTAGACAGGCATGTTTCAAGGCCAACTACAAGAAAAGGAAGCTAGGGCAGAGGGAACCAGAGTGTTCTTCTTGGAGTGGCTGTGGTACAAGTATTGACGCAATGCCAGAATATAGTAATGAAAGTGAAGAAGAACTAGAGATCAAGTATCTTATGTCTCAGTTATAG 870 0.4207 MESHPLMGWSSYYQIEENPFPFTGHFSYSEISGVYPPLHDIAIQDYHYDAVPLMEYYPSVPLYETLAIEPTPSLRADYDFYDINKGLSVWNEVDAVFDSEVGFLFRNNEERGGGLKEMMENKQGREERTNSSSSRMLSRKTISQYFYMPITQAARELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVQELLKEEGPESEEKLKYAIETLESEKKLLEEMPDIELEDNTKRLRQACFKANYKKRKLGQREPECSSWSGCGTSIDAMPEYSNESEEELEIKYLMSQL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01341 289 MobiDBLite consensus disorder prediction 114 133 - -
Phco8g01341 289 ProSiteProfiles RWP-RK domain profile. 119 204 IPR003035 -
Phco8g01341 289 MobiDBLite consensus disorder prediction 114 134 - -
Phco8g01341 289 Pfam RWP-RK domain 137 184 IPR003035 -
Phco8g01341 289 PANTHER PROTEIN RKD4 120 252 IPR044607 GO:0003700
Phco8g01341 289 Coils Coil 203 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01341 Phco-Chr8 13988072 13989275 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Phco8g01341 RWP-RK 4.9e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01341 8 13988072 13989275 Phco8g01341 8 13988072 13989275 ECH
Phco8g01341 8 13988072 13989275 Phco7g02240 7 39562619 39563938 PCT