Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01304 ATGTGGCTTTTCACTTCTCTTCCATTGGCTCTTACCAATCAAAATTTTGTTGACTTACTGGCGAAACTTCAGAGTTCAAATTTGTTGAGAGATTGGAAAATGGAAATGGGGATTGTAGGGTGGAGTTCTCTGGTGATTATGCTGACTGTTTTCTGCCCTTCTTCTCTTGCTCTCACCCTGGATGGTCTGGCCTTGTTGGAAATCAAAAGTACTTTTAATGATACTAAGAATGTGCTGGGCAACTGGCTAGAGTTTGATGAGACTCATTGTGCATGGACTGGTATCTCTTGTCACTCTGGCGATGAGCAAAGAGTTCGCTCAATAAATCTGCCATACATGCAACTTGGAGGAATTATATCTCCCAGCATTGGTAAACTCAGTAGGCTACAAAGATTGGCACTTCATCAGAACAGTTTGCATGGAACCATTCCTAATGAACTTACCAATTGTACTGAGCTAAGAGCCCTGTACTTGAGGGGTAATTTTTTCCAAGGAGGCATACCGTCAAACATTGGAAATCTTTCATATTTAAATATACTGGATTTGTCAAGTAACACGTTAAAAGGTGCTATACCTTCCTCTATTGGCCGGCTCTCGCATTTGCAAATTCTGAACTTGTCTACCAATTTCTTTTCCGGTGAAATTCCTGACATTGGAGTACTAAGCACCTTTGACAAGAGCTCGTTTAATGGAAATTTAGATCTTTGTGGGCGGCAAGTCCAAAAGCCGTGTAGGACATCACTTGGTTTTCCTGTGGTACTGCCCCATGCTGAAAGTGATGAAGCTGCAGTCCCAGCCAAAAGGTCTTCACATTACATGAAGGGGGTGCTAATTGGTGCAATGGCAACAATGGGTCTCGCACTTGTCATGATCCTTTCATTCCTCTGGACTCGTTTATTATCAAAGAAGGAACGAGCTGCGAAGAGATACACGGAAGTCAAGAAACAAGTTGATCCAGGAACAAGCACAAAACTTATTACTTTCCATGGTGACCTGCCATACACATCATCTGAGATCATAGAGAAGCTGGAGTCTCTAGATGAAGAGCATATAGTAGGATCAGGAGGGTATGGTACTGTTTACCGAATGGTGATGAATGATTGTGGTACATTTGCTGTTAAACGGATTGATCGAAGTTGTGAAGGGTCTGATCAAGTGTTTGAAAGGGAACTAGAGATCTTGGGGAGCATCAAGCACATTAATCTAGTAAATATGCGTGGTTACTGCAGGCTTCCTTCTTCAAGACTCCTTATCTATGACTATTTGGCTTTAGGCAGCTTAGATGATCTCTTGCATGAAAATACTCAACAAAGACGAATACTGAACTGGAGTGATCGCCTAAAGATAGCTCTTGGTTCTGCCCGGGGTTTGGCTTACTTGCACCATGAATGCAGCCCAGAAATTGTTCACCGTGACATAAAATCTAGCAACATACTCCTTGATGAAAACATGGAGCCACATATATCTGATTTTGGCCTCGGAAAGCTTTTGGTCGATGAAGAGGCCCATGTTACGACAGTGGTAGCTGGCACATTTGGGTATTTGGCACCAGAGTATCTACAAAGTGGAAGAGCAACTGAGAAGTCAGATGTGTATAGCTTTGGAGTTCTATTACTCGAACTTGTAACTGGAAAGAGGCCAACAGATCCCTCCTTTGTAAAAAGAGGTTTAAATGTTGTTGGTTGGGTGAACACATTACTGAGAGATAACAGATTGGAAGATGTGGTGGACAAAAGATGCAGTGATGCAGATGCAGGAACCCTTGAAGTAATTCTTGAGCTAGCAGCAAGATGCACAGATGGAAATGCAGATGATCGTCCATCAATGAACCAGGTGTTACAGTTGCTGGAACAAGAGGTTATGTCTCCTTGTCCAAGCGAGTTTTACGAGTCTCATTCAGATCACTGA 1908 0.4256 MWLFTSLPLALTNQNFVDLLAKLQSSNLLRDWKMEMGIVGWSSLVIMLTVFCPSSLALTLDGLALLEIKSTFNDTKNVLGNWLEFDETHCAWTGISCHSGDEQRVRSINLPYMQLGGIISPSIGKLSRLQRLALHQNSLHGTIPNELTNCTELRALYLRGNFFQGGIPSNIGNLSYLNILDLSSNTLKGAIPSSIGRLSHLQILNLSTNFFSGEIPDIGVLSTFDKSSFNGNLDLCGRQVQKPCRTSLGFPVVLPHAESDEAAVPAKRSSHYMKGVLIGAMATMGLALVMILSFLWTRLLSKKERAAKRYTEVKKQVDPGTSTKLITFHGDLPYTSSEIIEKLESLDEEHIVGSGGYGTVYRMVMNDCGTFAVKRIDRSCEGSDQVFERELEILGSIKHINLVNMRGYCRLPSSRLLIYDYLALGSLDDLLHENTQQRRILNWSDRLKIALGSARGLAYLHHECSPEIVHRDIKSSNILLDENMEPHISDFGLGKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWVNTLLRDNRLEDVVDKRCSDADAGTLEVILELAARCTDGNADDRPSMNQVLQLLEQEVMSPCPSEFYESHSDH 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01304 635 Pfam Protein kinase domain 348 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01304 635 ProSiteProfiles Protein kinase domain profile. 346 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01304 635 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 58 221 - -
Phco8g01304 635 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 422 628 - -
Phco8g01304 635 Gene3D Ribonuclease Inhibitor 59 246 IPR032675 -
Phco8g01304 635 SUPERFAMILY Protein kinase-like (PK-like) 326 617 IPR011009 -
Phco8g01304 635 SUPERFAMILY L domain-like 61 219 - -
Phco8g01304 635 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 83 217 - -
Phco8g01304 635 Pfam Leucine rich repeat N-terminal domain 61 97 IPR013210 -
Phco8g01304 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Phco8g01304 635 Gene3D Transferase(Phosphotransferase) domain 1 422 626 - -
Phco8g01304 635 SMART serkin_6 346 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01304 635 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Phco8g01304 635 Gene3D Phosphorylase Kinase; domain 1 306 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01304 Phco-Chr8 13627163 13631430 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Phco8g01304 Pkinase 5.9e-47 CL0016