Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01292 ATGTCCCTACACCTGCTCTTTTACTGGGTCTTTCCATGCCCACCAGATCCGCTTGTTAATAAAGCATGCTACCAATCATCATCTCTCAACATAGCTGGGGGGGATTCAAGAATGACCCTTAAGGGTGGCACAACCCAAGCCTGTGCGGCATGCAAACACCAGAGGAGAAAGTGCACTTCTGAATGCGTTCTTGCACCCTACTTCCCTGCAGACCAACCCAAGATCTTTCTCAACGTCCACAAGCTTTTCGGAGTCAGCAATATCGTAAAGATATTGAAGATTTTGGAGCCTAACCAGAAGAAAATAGCCATGGACTCTATCATTATTCAAGCAAATTATAGGGATAAGTACCCTGTACATGGCTGTTGGGAAGAGATTTGTAGGCTGCAATACCAAATATGGCTTGCAGAAGAAGAGCTTCATGCAGTTTATCAACAGCTTGAAATATGCAGGCACCAGCAGCAACAACAACAGCAACTGCATCATCATCACCAAGGCCCTTCCATGCCTGATGATGTTACTTCACAATTAGAATTGGGCATGACACCATGTACTAATAATAATGCACTCCCATTGTTTAATCATCATACTCCACAACCAAACACTTACAACAATAATGTGACTGCATTGTCTGTGTCACAGCAACATTCCTATTCCAACAGTAACAGCTTGGATTATAGCTCCCTCTACTTAGATTCCAAGGATAATGCTATTAATCCTTTGTGGGTTCAGTACCCCTGTTCAAATAATGACAATTCTGTAGGAATGCAAACTCCATTGGTTTCTTCACAGCCATTGGCCATCCAACAAAATGTTGTTGAGGATTATGTTGACATGCCTCCCATTTTTGATTCAGTTGATGATAGACAATCATACATTTATTCCAAGGAGCCTTACGAATCAAGTTCAGAAGAATCACTGAAAGATATAAGAAAGTGCACAGATCATGTTTCAGAGAATGAATTGAAGAGTGCTGCAGCCTGCTTTAGCCTTACCAGTGTCAACTAA 1008 0.4187 MSLHLLFYWVFPCPPDPLVNKACYQSSSLNIAGGDSRMTLKGGTTQACAACKHQRRKCTSECVLAPYFPADQPKIFLNVHKLFGVSNIVKILKILEPNQKKIAMDSIIIQANYRDKYPVHGCWEEICRLQYQIWLAEEELHAVYQQLEICRHQQQQQQQLHHHHQGPSMPDDVTSQLELGMTPCTNNNALPLFNHHTPQPNTYNNNVTALSVSQQHSYSNSNSLDYSSLYLDSKDNAINPLWVQYPCSNNDNSVGMQTPLVSSQPLAIQQNVVEDYVDMPPIFDSVDDRQSYIYSKEPYESSSEESLKDIRKCTDHVSENELKSAAACFSLTSVN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01292 335 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 45 194 - -
Phco8g01292 335 Pfam Lateral organ boundaries (LOB) domain 47 143 IPR004883 -
Phco8g01292 335 ProSiteProfiles LOB domain profile. 46 147 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01292 Phco-Chr8 13532698 13534392 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco8g01292 LOB 8.3e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01292 8 13532698 13534392 Phco8g01292 8 13532698 13534392 ECH