Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01281 ATGAACAGCGCGTGGACCCATCCTTTGAAGTTCTACGTTTGCTCGTCAAATCGAATCAATCATTCACCAATTCGATTCACTGAATGCAAAGTGCAATGTAATCTCATCTCTCTCTCCCTGGAAGGAAAAATGGTGTCAACATATGAGAAGAAGACCAACCTCACCAAACTCATCATCCCTTCTTCTTCTTCTTCTTCCCCATCCCCATCCCCATCCATCACAAGCCCACACGTCATCCACAGTAGGTCCCACTCCTTTGTGGGGCCCTCCCCGCGCTTCAATCCCTCTTCCACCCCTCTCTTCTTCGTCCACGAGGACGACGACGAGGACGAAGAAAAGGAACCTCTTGTTTCTGACCCTGTTAAGATTGGACCTTCCGATTTTCATATTCTACGAGTTGTAGGGCAGGGTGCCTTTGGCAAGGTCTTTCTTGTTAGGAAAAAAGGAAATTGCTTCGATGGTGACGGGGTCTTCGCCATGAAGGTCATGAGAAAGGACACCGTCATAAAGAAAAACCATGTTGATTACATGAAAGCGGAGAGGGATATTCTCACTAAAGTTCTTCATCCTTTCATTGTTCAGCTGCGTTACTCTTTTCAGACCAAATCTAAGTTATATTTGGTGTTGGATTTTATAAATGGAGGGCATCTCTTCTTTCATTTGTATCGCCAGGGTATCTTCAGTGAGGATCAGGCAAGGCTTTACACTGCTGAGATAGTGTCTGCTGTTTCACATCTTCACAGCAAAGGCATCGTGCATCGGGATCTTAAGCCTGAAAACATTCTAATGGATTCTCATGGGCATGTCATGCTGACTGATTTTGGAATGTCAAAAGAGATTGATGAATTGGGAAGATCCAACTCTCTTTGTGGGACCGTGGAATATATGGCTCCTGAAATTCTTCTGGCTAAAGGCCATAACAAGGATGCGGATTGGTGGAGTGTTGGTATCCTGTTGTATGAAATGCTAACAGGGAAGGCACCATTTACACACACTAACAGAAAGAAACTTCAGGAGAAAATTATTAAAGAGAAAGTTAAACTTCCACCATTCCTTACCAGTGAAGCTCATTCATTACTCAAAGGATTGCTGCTAAAGGATCCGACGACAAGGTTAGGACATGGGCCAAATGGAGATGATCAGATCAAAAGTCATAAATGGTTTAGGTCAATCAATTGGAAAAAATTGGAGGCAAGAGAAGTGGAACCAAAGTTTAAACCAGATGTGTCTGGGAAAGACTGTACAGCTAATTTTGACAAATGTTGGACAGCAATGCCCCCTAATGACTCGCCAGCAACCACACCTACAGCAGGTGACCATTTCCAGGGCTATACTTATGTGGCACCCAACCCTTGGCTTTCGTCTCGCTCCCCAGAATGA 1380 0.4435 MNSAWTHPLKFYVCSSNRINHSPIRFTECKVQCNLISLSLEGKMVSTYEKKTNLTKLIIPSSSSSSPSPSPSITSPHVIHSRSHSFVGPSPRFNPSSTPLFFVHEDDDEDEEKEPLVSDPVKIGPSDFHILRVVGQGAFGKVFLVRKKGNCFDGDGVFAMKVMRKDTVIKKNHVDYMKAERDILTKVLHPFIVQLRYSFQTKSKLYLVLDFINGGHLFFHLYRQGIFSEDQARLYTAEIVSAVSHLHSKGIVHRDLKPENILMDSHGHVMLTDFGMSKEIDELGRSNSLCGTVEYMAPEILLAKGHNKDADWWSVGILLYEMLTGKAPFTHTNRKKLQEKIIKEKVKLPPFLTSEAHSLLKGLLLKDPTTRLGHGPNGDDQIKSHKWFRSINWKKLEAREVEPKFKPDVSGKDCTANFDKCWTAMPPNDSPATTPTAGDHFQGYTYVAPNPWLSSRSPE 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01281 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Phco8g01281 459 SUPERFAMILY Protein kinase-like (PK-like) 126 452 IPR011009 -
Phco8g01281 459 ProSiteProfiles AGC-kinase C-terminal domain profile. 389 456 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phco8g01281 459 SMART pkinase_C_6 389 448 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phco8g01281 459 FunFam Non-specific serine/threonine protein kinase 212 407 - -
Phco8g01281 459 ProSiteProfiles Protein kinase domain profile. 128 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01281 459 PANTHER RIBOSOMAL PROTEIN S6 KINASE 78 450 - -
Phco8g01281 459 Pfam Protein kinase C terminal domain 409 446 IPR017892 GO:0004674|GO:0005524|GO:0006468
Phco8g01281 459 Gene3D Transferase(Phosphotransferase) domain 1 212 407 - -
Phco8g01281 459 Pfam Protein kinase domain 128 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01281 459 ProSitePatterns Protein kinases ATP-binding region signature. 134 161 IPR017441 GO:0005524
Phco8g01281 459 MobiDBLite consensus disorder prediction 59 92 - -
Phco8g01281 459 Gene3D Phosphorylase Kinase; domain 1 126 430 - -
Phco8g01281 459 SMART serkin_6 128 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01281 459 FunFam Non-specific serine/threonine protein kinase 126 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01281 Phco-Chr8 13400869 13404139 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Phco8g01281 Pkinase 1.3e-70 CL0016