Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01270 ATGGCCATCGTCGGTGATTTTTTCCGCCACAACTTAACGGAATTTCTCCACGACTCACCTTCTGCTGCGCCCGAGCTTCACGTTCTTGCGGTCGATGACAGCCACGTTGATCGCAAGGTCATTGAACGGTTGCTCAAGATTTCTTCCTGCAAAGTGACGGTTGTGGAGAGTGGAACGCGTGCTCTTCAGTATTTGGGCTTGGACGGAGAGACCAGTTCTCTCGGGTTCAATAGTGTGAATGTTAATCTCATAATGACGGATTATTCCATGCCGGGGATGACAGGATATGAATTACTCAAGAAAATCAAGGAGTCTTCCGTGTTTAGAGAGATTCCAGTGGTGATAATGTCATCGGAGAATGTTTTGACTCGAATTGATAGTTGCCTGGAGGAAGGAGCAGAGGAGTTTCTTTTGAAACCTGTGAAATTGTCAGATGTAAGACGCTTAAAAGATTTCATCATGAAAGGGAAAGCGAAGGAAGATGAGAAAAGATCTCTCAAAAGAATGCGGTCAATTGATTGCAGTCCACCTCCGTCTGCAACATGCTCAACCATCTCTCTTCCATGCGATCCATCACCATCATTGCTCTCACCATTATCCTCAAAGAAGGCTAGGTTGTGA 621 0.4557 MAIVGDFFRHNLTEFLHDSPSAAPELHVLAVDDSHVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGETSSLGFNSVNVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDSCLEEGAEEFLLKPVKLSDVRRLKDFIMKGKAKEDEKRSLKRMRSIDCSPPPSATCSTISLPCDPSPSLLSPLSSKKARL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01270 206 Gene3D - 26 180 - -
Phco8g01270 206 SMART REC_2 26 150 IPR001789 GO:0000160
Phco8g01270 206 Pfam Response regulator receiver domain 28 147 IPR001789 GO:0000160
Phco8g01270 206 MobiDBLite consensus disorder prediction 164 185 - -
Phco8g01270 206 CDD REC_typeA_ARR 28 149 - -
Phco8g01270 206 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 163 IPR045279 GO:0009736
Phco8g01270 206 ProSiteProfiles Response regulatory domain profile. 27 154 IPR001789 GO:0000160
Phco8g01270 206 SUPERFAMILY CheY-like 25 166 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01270 Phco-Chr8 13293963 13295743 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco8g01270 Response_reg 5e-21 CL0304