Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01268 ATGGCCATTCTCGGCGATTTTTTCCGCCATAACTTACCGGAATTTCTCCAGGAATCCCCTTCTGGTGCGCCAGAGCTTCACGTTCTTGCAGTCGATGACAGCCTTGTTGATCGCAAGGTCATTGAACGGTTACTCAAGATTTCTTCTTGCAAAGTGACGGTTGTGGAGAGTGGAACGCGTGCTCTTCAGTATTTGGGCTTGGACGGAGAGACTAGTTCTCTCGGGTTCGATAGTGTGAAGGTTAATCTCATAATGACGGATTATTCCATGCCGGGGATGACAGGATATGAATTACTCAAGAAAATCAAGCAGGAGTCTTCCGTGTTTAGAGAGATTCCAGTGGTGGTCATGTCGTCGGAGAATGTTTTGACTCGAATTGATAGTTGCCTGGAGGAAGGAGCAGAAGAGTTTCTTTTGAAACCTGTGAAATTGTCAGATGTAAGACGCTTAAAAGATTTCATCATGAAAGGGAAAGTGAAGGAAGTTGAGAAAAGATCTCTCAAAAGAATGCGGTCAATTGATTGCAGTCCACCTCTGTCTGCAACATGCCCAACCGTCTCTCTTCCATGCGATCCATCACCATCATTGCTCTCACCATTATCCTCAAAGAAGGCTAGATTGTGA 624 0.4519 MAILGDFFRHNLPEFLQESPSGAPELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGETSSLGFDSVKVNLIMTDYSMPGMTGYELLKKIKQESSVFREIPVVVMSSENVLTRIDSCLEEGAEEFLLKPVKLSDVRRLKDFIMKGKVKEVEKRSLKRMRSIDCSPPLSATCPTVSLPCDPSPSLLSPLSSKKARL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01268 207 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 159 IPR045279 GO:0009736
Phco8g01268 207 CDD REC_typeA_ARR 28 150 - -
Phco8g01268 207 ProSiteProfiles Response regulatory domain profile. 27 155 IPR001789 GO:0000160
Phco8g01268 207 Gene3D - 26 177 - -
Phco8g01268 207 SMART REC_2 26 151 IPR001789 GO:0000160
Phco8g01268 207 Pfam Response regulator receiver domain 28 148 IPR001789 GO:0000160
Phco8g01268 207 SUPERFAMILY CheY-like 25 157 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01268 Phco-Chr8 13273194 13275023 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco8g01268 Response_reg 2.7e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01268 8 13273194 13275023 Phco7g02184 7 38718808 38720716 PCT