Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01222 ATGGCGTTTGATCAAAATTCCGTTCCGTTGGATCTCCGACCGTTGAATGTAGCCGCCGCAGTGGCGGAGGAGCCGATGATTTCGCCGGCCACCATCACGCCGCCGACTCCGAATTCTGTTGGCGAGCTTTTTTACCAGCCGGCGTCCTCCGCTGCCTGTACAACGTGGTGCGTCCGCCCAATTACGCATGCCAACGTGAGCCCTGCCGCGGCGTATGGGTTTAACTACGGCGGTTCGAGCTTTGGCAATCGCGTCGTGGCCGGGAATGCTATGAGTTTGGGGAAGCTTGTGGGGTGTAGTGGATTGGACAAGGCCTGCAATGATGCGAATAGTTTTGGTTATGGTGTTGGCGGGGTTCGGGGTAGCAGAGTGATCGGGAGTGGCAGCGATCACGGTGGCAGGGGTGAGGGTGGTGGCAGCTGTGATGATTCGACGTCCGGGAGGAAGGTGAAGTTTCTCTGCAGTTTTGGCGGGAAGATTTTGCCTAGGCCTAGTGATGGAATGTTGAGATATGTTGGGGGGCAAACAAGGATCATTAGTGTTAGGAAGGATGTGAGTTTCAATGATTTGGTGCAGAAGATGATTGACACTTATGGGCAGGCCGTGGTTATCAAGTATCAGCTTCCTGAAGAGGATCTTGATGCCTTGGTTTCCGTGTCGTGTCCCGATGATGTTGAGAATATGATGGAAGAGTATGATAAGTTGGTTGAGAGATCTCCCGACGGTTCTGCAAAACTAAGAGTTTTTCTGTTTTCTGTTTCGGAGACTGAAGTTTCTAGTGGGGTGCAGTTGGGGGACTTGCAGGATACTGGGCAAAAATATTTTGATGCTGTGAATGGGATTGGTACGACAGAGGCGACTGGGTTTGCAGGTGGGATCAATCGCAAGGAGAGTGTTGCAAGTGCTGCTTCAACCCAGAATTCTGATTTTAGCGGGGCTGAGACTTTGGATTGTTCAATTACTGGTCAAGGGGATGTCATTGTGATGCCCTTGTCATCACCTAAAGATAATGTGGCAGCAACTTCCTCAGACTCAAGTGCTAATATGGAGATTTCAGATTCCAGTGCACCGGTTTACTCAGGTGTTTGCGCAGTTTCGATTGCCATGCCTGTGGCTCGGGCTAGTCCAACCCCATCCCACAATACTTATTTTCAGAATGAGGTTGAGTTAGAAAGGTCTGTCCCTGTTGTTTTGCCCCAACAGCCTTTTGGATTGCAGCAAGCTGGAATAGAAGTTCCAGCCCCTTCATCTTATTTGCAGCCATGTGTTGATCCTAGCCAGGAGGTTATGAATCATCCAGACTATGTCCAGGTTACTTCACAGATGAGGTTCACAAACCCTCAGCTTGTAGGAACAACTGGGCCTGGCTTGAGGCAACAACAGTTTTCTGATACTCCCGGCTTAGCGTTCCATCATCAGGTCATCCCTGGGGTACAAATGCCTGTGGCTCCACAATCTTCTCACGCTGGTCTGAGACCGAATGTTATTCAATCACAATCGTTGGTGCAACAACAACAACATCTTTTGGATCAATACCATGATGATAATACATCAGGGCTAAGGTTTATCCAGCTTCCTGCTGAACGTAGCTACAACACTTACCAAGTTCCAGTGAATCAAGTACCACCTGTCATAGTTGGAGGCAATTATGGTTGGGTTCAGGTTCCTTCACAAGAGCGCGTTGTTATCTCTGATGGACTATTACCTCAACAACAGGTAACGAGCCCTGAGAAATTCCAAAGAACCGAGGAATGTTCTCTGTGTCAGACAAAACTACCTCATGCACATTCAGATCCAGTAGTTCAGGATGAGCGCAGTAGTGGTGCAGGTCCTGTTCCTGATTCAACTCCAAGTCACTATAGCTTCCCAATGGAGGACAACGTAAAAGCTCAAGCACCAAATAGGATTACGCCAGTGGTGATGCCGCCGTTGAAGGAAGGCCTTGCTGAACAAGGGGCTAGGACCAGACCCTGTGTCGTCGGCAAACTGGAACCTCCTGATGGAGTGCATCATACTGAGACCACTGGGCTTTCTCATAACATTGAGCCACAGCCAGAAGAATTTAATCATCCCGGGAATTCATTTCTCCAGGAAAAAATTGCATTCAAAGGTAGAAATCAATCTCCAAATGATGAGCTCATGGGAACAACAACACTGTCTTATTTAGATGATGTTGGCGACCAACACATAGTACCAGTTGAAAACTGGGTTAAACAGGATGTGCTTATTAACAAACCTATGAATAGTGATATGCCTGTAGTTGATGGAACATCTATACGAACTTCAGAGTGCATGGTTCAAGGATCTCCAAATGAATATACTGATGAACGTAGTGGCGTTGTTTCTAAATCAGATGAGATAGATAATTGGATTAGACAAGACCATCTAAAACCTATTGATGGAAGGATGGACACCTTCAAGATACACAATTCTGATGCTTATGTAAGTAATGACTACTCTTTTCTGCCAGCTGATAAACCCAGTGGGAATGATAATTTAGGGTACAACACTCAGAAATCCGCAGAGGAAGAGGTCATTCTGGATAACAACTTTGGCAGGTCAAAGTTGATAGTTGATGCAAATCAAAATAAGAGGGCAGGTGTGCTGCCTTGTTCTTCTATGGAAATTTCATACAGGAAAAATTCCAGGTCAGGGGAACACAAAGAGGCTACACAACCCCCTGTTTGGGGCATTCCTGACTCAAATCCTCAACCGAATATAGGAAACCCCCACACCAACGATCCAGCACTATCTTCATCATCCCCATCTATCAGGTTTGGAGATGTGCAGGATACTCCGAACTCACTTTTTAGCAATCAGGATCCATGGAATATACAGCATGGTACCTTCTTTCCACCTGGTAGACCTAGCAAAGCTTCATTGAAGAAAGAGACCTATTCTTGTCAGGATCCCTTTAGTAAGGATCCTGACAACTTTGGGGAACAAAGTTTAGAAGCCCAGTTGGATGATAGCCTCTATCAGTCATTCAAACAAAATTTAACTTTAGAACATGGTCGATCTGCCAAAGGTTCTGCAGAAGACCAACAACTCCAAGCTGTTGCGGAAAATGTAGCAGCTTCTGTTTTGCACTCAAGAAATCCTTCAAATTCTGACTTGCATTCCCGAGATATTTCCTGCTGTGAGAACATTGAGGATGCCAGTGTTCAAAATAATCTAATGGATGTAAACTGTGGACATAAAACTCAGGATGTCAGGAGCAAGCAACTAGAAAAGACAAATTTTGGATTTCCAGCATCAGGTTTTGGAAAATTACAGGTTATTAAGAACTGTGATCTTGAAGAACAGAAAGAACTCGGTTCTGGTACATTTGGGACCGTCTATCATGGAAAATGGAGGGGCACTGATGTTGCAATCAAGCGCATTACTGATAGGTGTTTTGCGGGAAAACCTTCAGAGCAGGAGCGCATGAGAAATGACTTCTGGAGTGAGGCAATCAAGCTTGCTGACTTGCACCATCCAAATGTGGTAGCTTTCTACGGTGTTGTGCTTGATGGGCCAGGGGGTTCTGTGGCAACAGTTACTGAATATATGGTTAATGGTTCTTTAAGAAACGCCTTGCAGAAGAGTGAGAGGATTCCTGACAAGCGCAAGCGACTTTTGATTGCAATGGACGTGGCCTTTGGCATGGAGTACCTACACGGAAAAAACATTGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTTAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGAGACTTGGGTCTGTCCAAAGTAAAATGTCAGACACTGATCTCTGGCGGGGTGAGAGGAACTCTGCCGTGGATGGCTCCAGAACTGCTGAACGGAAGCAGCAGCCTTGTTTCAGAGAAGGTTGACGTATTTTCATTTGGCATTGTGATGTGGGAACTCTTCACTGGGGAGGAGCCATATGCTGACTTGCACTATGGTGCTATTATTGGTGGTATAGTGAGCAACACTTTGCGTCCTCCTATTCCAGAATCTTGTGATCCAGAATGGACATTGTTAATGGAGAGGTGCTGGTCATCAGAGCCATCAGAGAGACCAACCTTCACTGAGATTGCCAATGAATTGCGTTCTATAGCGGCCAAGATCTCTCCCAAAGGACAAAACCAACAGCTGCAACACTCTCCATTGCACACTCAACTCCACAAATGA 4170 0.4616 MAFDQNSVPLDLRPLNVAAAVAEEPMISPATITPPTPNSVGELFYQPASSAACTTWCVRPITHANVSPAAAYGFNYGGSSFGNRVVAGNAMSLGKLVGCSGLDKACNDANSFGYGVGGVRGSRVIGSGSDHGGRGEGGGSCDDSTSGRKVKFLCSFGGKILPRPSDGMLRYVGGQTRIISVRKDVSFNDLVQKMIDTYGQAVVIKYQLPEEDLDALVSVSCPDDVENMMEEYDKLVERSPDGSAKLRVFLFSVSETEVSSGVQLGDLQDTGQKYFDAVNGIGTTEATGFAGGINRKESVASAASTQNSDFSGAETLDCSITGQGDVIVMPLSSPKDNVAATSSDSSANMEISDSSAPVYSGVCAVSIAMPVARASPTPSHNTYFQNEVELERSVPVVLPQQPFGLQQAGIEVPAPSSYLQPCVDPSQEVMNHPDYVQVTSQMRFTNPQLVGTTGPGLRQQQFSDTPGLAFHHQVIPGVQMPVAPQSSHAGLRPNVIQSQSLVQQQQHLLDQYHDDNTSGLRFIQLPAERSYNTYQVPVNQVPPVIVGGNYGWVQVPSQERVVISDGLLPQQQVTSPEKFQRTEECSLCQTKLPHAHSDPVVQDERSSGAGPVPDSTPSHYSFPMEDNVKAQAPNRITPVVMPPLKEGLAEQGARTRPCVVGKLEPPDGVHHTETTGLSHNIEPQPEEFNHPGNSFLQEKIAFKGRNQSPNDELMGTTTLSYLDDVGDQHIVPVENWVKQDVLINKPMNSDMPVVDGTSIRTSECMVQGSPNEYTDERSGVVSKSDEIDNWIRQDHLKPIDGRMDTFKIHNSDAYVSNDYSFLPADKPSGNDNLGYNTQKSAEEEVILDNNFGRSKLIVDANQNKRAGVLPCSSMEISYRKNSRSGEHKEATQPPVWGIPDSNPQPNIGNPHTNDPALSSSSPSIRFGDVQDTPNSLFSNQDPWNIQHGTFFPPGRPSKASLKKETYSCQDPFSKDPDNFGEQSLEAQLDDSLYQSFKQNLTLEHGRSAKGSAEDQQLQAVAENVAASVLHSRNPSNSDLHSRDISCCENIEDASVQNNLMDVNCGHKTQDVRSKQLEKTNFGFPASGFGKLQVIKNCDLEEQKELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRNDFWSEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKSERIPDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELFTGEEPYADLHYGAIIGGIVSNTLRPPIPESCDPEWTLLMERCWSSEPSERPTFTEIANELRSIAAKISPKGQNQQLQHSPLHTQLHK 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01222 1389 MobiDBLite consensus disorder prediction 879 933 - -
Phco8g01222 1389 MobiDBLite consensus disorder prediction 126 145 - -
Phco8g01222 1389 MobiDBLite consensus disorder prediction 902 933 - -
Phco8g01222 1389 CDD PB1_UP2 153 251 - -
Phco8g01222 1389 Gene3D Phosphorylase Kinase; domain 1 1092 1186 - -
Phco8g01222 1389 SUPERFAMILY CAD & PB1 domains 165 256 - -
Phco8g01222 1389 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1092 1186 - -
Phco8g01222 1389 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 169 253 - -
Phco8g01222 1389 PRINTS Tyrosine kinase catalytic domain signature 1218 1236 IPR001245 GO:0004672|GO:0006468
Phco8g01222 1389 PRINTS Tyrosine kinase catalytic domain signature 1333 1355 IPR001245 GO:0004672|GO:0006468
Phco8g01222 1389 PRINTS Tyrosine kinase catalytic domain signature 1289 1311 IPR001245 GO:0004672|GO:0006468
Phco8g01222 1389 PRINTS Tyrosine kinase catalytic domain signature 1181 1194 IPR001245 GO:0004672|GO:0006468
Phco8g01222 1389 SUPERFAMILY Protein kinase-like (PK-like) 1092 1361 IPR011009 -
Phco8g01222 1389 MobiDBLite consensus disorder prediction 595 620 - -
Phco8g01222 1389 ProSiteProfiles Protein kinase domain profile. 1099 1365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01222 1389 SMART serkin_6 1099 1365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01222 1389 Pfam Protein tyrosine and serine/threonine kinase 1100 1362 IPR001245 GO:0004672|GO:0006468
Phco8g01222 1389 CDD STKc_MAP3K-like 1105 1362 - -
Phco8g01222 1389 ProSitePatterns Protein kinases ATP-binding region signature. 1105 1136 IPR017441 GO:0005524
Phco8g01222 1389 Gene3D Transferase(Phosphotransferase) domain 1 1187 1388 - -
Phco8g01222 1389 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1187 1378 - -
Phco8g01222 1389 SMART PB1_new 164 253 IPR000270 GO:0005515
Phco8g01222 1389 Pfam PB1 domain 169 252 IPR000270 GO:0005515
Phco8g01222 1389 MobiDBLite consensus disorder prediction 1370 1389 - -
Phco8g01222 1389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1224 1236 IPR008271 GO:0004672|GO:0006468
Phco8g01222 1389 Gene3D - 170 252 - -
Phco8g01222 1389 PANTHER SERINE-THREONINE PROTEIN KINASE 207 1366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01222 Phco-Chr8 12749215 12756227 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Phco8g01222 PK_Tyr_Ser-Thr 7.6e-60 CL0016