Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01214 ATGTGTGTGCAAGAGGGTGAACAAGTTGGTGAGGATATAGAGAAGAGCGTCGATAACAGAAGGGTGTCATGGCCATTACATTGTAATCTCTTGCAAGCCCACATGGACAACAGGGAAAAAGACTCTTCCTTTAGAGCTCCCACTGACCAGATCAGTGTTGCAAATTCATTTCCTTTGGAAAGCATATGTGAGGATACAGAAACTGTGGACAAAAAACAGAACCTGATGAACTTTGTCCCTACTCTTCGGTCTGGAGAGTGGTGTGATATTGGAGAGCGCACTTCCATGGAGGATACCCACATATGCATTGGAGACTTGGCCAAAAAATTTGGCAATAACATACTTTCCGAGGAAGTTATTTCCTTTTATGGTGTATTTGACGGACATGGTGGGAAGAGTGCTGCACAATTCGTTCGTGATCATCTACCACGGGTGATTGTTGAGGATGCTGACTTTCCTTTAGAACTTGAGAAGGTTGTCACAAGGTCATTTTTGGAGACTGATGCTGAGTTTGCAAGAACATGTTCTATTGAGTCTTCCCTATCTTCTGGCACAACTGCATTGACAGCAATTATATTTGGAAGGTCTTTACTTGTAGCTAATGCCGGAGACTGCCGTGCGGTGTTATCTCGTGGTGGACGGGCCATAGAAATGTCCAAAGATCACAGGCCGTTGTGCATGAAAGAAAGGAAGAGGATTGAGTCTGTAGGTGGATTCATAGATGATGGTTACCTGAATGGGCAGTTAGGTGTGACTCGTGCTCTAGGCGACTGGCATCTTGAAGGAATGAAGGAAATGAATGGAAAGGATGGACCATTGAGTGCTGAACCTGAACTTAAATTGCTGACATTGACCAAAGAAGATGAATTTTTTATAATTGGCAGTGATGGAATATGGGATTTTTTTCGCAGCCAGAACGCAGTGGACTTTGCTCGAAGAAGGCTTCAAGAACACAATGACGTGAAGAAGTGTTGCAAAGAGATAATAGAAGAAGCAATAAAGAGAGAAGCAACAGACAACTTGACAGTGGTAATGGTGTGTTTTCACTCAGAACCACCACCTCCTGTGGTAGTAGAAAGGCCTAGAGTCAGACGAAGCATATCTGCTGAGGGACTTCAAAATCTTAAATGCTTGCTAGAAGGATAG 1146 0.4354 MCVQEGEQVGEDIEKSVDNRRVSWPLHCNLLQAHMDNREKDSSFRAPTDQISVANSFPLESICEDTETVDKKQNLMNFVPTLRSGEWCDIGERTSMEDTHICIGDLAKKFGNNILSEEVISFYGVFDGHGGKSAAQFVRDHLPRVIVEDADFPLELEKVVTRSFLETDAEFARTCSIESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRGGRAIEMSKDHRPLCMKERKRIESVGGFIDDGYLNGQLGVTRALGDWHLEGMKEMNGKDGPLSAEPELKLLTLTKEDEFFIIGSDGIWDFFRSQNAVDFARRRLQEHNDVKKCCKEIIEEAIKREATDNLTVVMVCFHSEPPPPVVVERPRVRRSISAEGLQNLKCLLEG 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01214 381 FunFam Probable protein phosphatase 2C 22 66 351 - -
Phco8g01214 381 PANTHER PROTEIN PHOSPHATASE 2C 70 346 IPR015655 GO:0004722|GO:0006470
Phco8g01214 381 SUPERFAMILY PP2C-like 74 350 IPR036457 -
Phco8g01214 381 CDD PP2Cc 83 348 IPR001932 -
Phco8g01214 381 Pfam Protein phosphatase 2C 92 340 IPR001932 -
Phco8g01214 381 ProSitePatterns PPM-type phosphatase domain signature. 122 130 IPR000222 GO:0043169
Phco8g01214 381 ProSiteProfiles PPM-type phosphatase domain profile. 83 348 IPR001932 -
Phco8g01214 381 SMART PP2C_4 73 346 IPR001932 -
Phco8g01214 381 Gene3D - 63 352 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01214 Phco-Chr8 12704526 12707392 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Phco8g01214 PP2C 2.5e-67 CL0238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01214 8 12704526 12707392 Phco8g01214 8 12704526 12707392 ECH
Phco8g01214 8 12704526 12707392 Phco7g02507 7 43882429 43885503 PCT