Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01207 ATGAAGTATGATCTTCATCAGGAAGTTGTGAGTTGTGAAATGTGTGAATGCAAGGTGAATATGGCACATCGTCCCCTGGTCATTGAAAACGGCTCTGCACAGCTTAGGAGCTACATAGAGCTGAAATTTCAAGATAAGTTAAACCAGGAATCAACTTGTTTTACTAGTCTTGTTGGTGAAATTGTTTTTCCAAAAGTGACACCACGGACTGTCAGGTATCACGCCAAGGCTAAGGATCACGTGAAACGGGAATTAGGAAAACCACACAGCAAGGTGCACAGAAATTGGGTTAGTGGAGTGGTTGATTGGTTAATGTTGCCCATATTTGATTCCCCAAAAAACATGGGATTTCATCGTACATGTCTTGTTTCAGATTTTAGGTGGCTCAGTTTAGGCGATGCTGCCATCTCTGGATACCAAAAGCCTGCATGGTTGGAAGCTCTTTACACACAAAAGTTCTTTGTGGGGTGCTCTTACCATGAGAACGCTAAAAAGAATGAGAAGAATGTGTTCTGCTTAGATTGTTGCACCAGTATTTGTCCTCACTGCTTGCCATCACATCGCTTCCACAGGCTTCTTCAGATTCGCCGTTACGTTTATCATGATGTTGTTAGGCTGGAAGATCTTCAGAAACTCATAGACTGCTCCAACGTTCAGGCCTATACCATCAATAGTGCCAAGGTGGTGTTCATCAAGAAGAGACCTCAAAACCGGCAATTCAAAGGGTCAGGAAACTACTGCACCTCCTGTGATAGAAGTCTTCAAGAGCCTTTCATCCATTGCTCTCTTGGATGCAAGGTTGATTTTGTGCTGAAACACTATAAGGATCTCTCTCCATACTTGAGAACATGCAACTCCCTACAACTAAGTCCTGACTTTCTGATCCCACAAGAGATGGGGGATGAGGAGATGACTCGTTCAACGGTTGTGGATTGTGATGAGCCAATGAGTTCATGTTCGGGGTCATCAGGGTCTGAGAACAACATGAGCATGTCTTGCACGGAGATTGTAAGGAAGAGGAGGAGTGGATGGAGCACTGTGTGTGCAAAATTCATGGCCAATAGCAATAACAAGGTTTCGGATGAAGATATGGCCACCAGCATGAGTAGAAGAAAAGGGATCCCTCATAGATCCCCACTGTGTTAG 1146 0.4415 MKYDLHQEVVSCEMCECKVNMAHRPLVIENGSAQLRSYIELKFQDKLNQESTCFTSLVGEIVFPKVTPRTVRYHAKAKDHVKRELGKPHSKVHRNWVSGVVDWLMLPIFDSPKNMGFHRTCLVSDFRWLSLGDAAISGYQKPAWLEALYTQKFFVGCSYHENAKKNEKNVFCLDCCTSICPHCLPSHRFHRLLQIRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSPYLRTCNSLQLSPDFLIPQEMGDEEMTRSTVVDCDEPMSSCSGSSGSENNMSMSCTEIVRKRRSGWSTVCAKFMANSNNKVSDEDMATSMSRRKGIPHRSPLC 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01207 381 MobiDBLite consensus disorder prediction 362 381 - -
Phco8g01207 381 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 139 380 - -
Phco8g01207 381 ProSiteProfiles Zinc finger B-box type profile. 157 195 IPR000315 GO:0008270
Phco8g01207 381 Pfam PLATZ transcription factor 196 267 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01207 Phco-Chr8 12635867 12640445 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Phco8g01207 PLATZ 8.7e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01207 8 12635867 12640445 Phco8g01207 8 12635867 12640445 ECH