Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01170 ATGGCTATTTCTGCGTTATTCTTGGTTCTGTTGCTGCAATTCTCAACAATTTTTGGCTCTGAGGTTGTCTTACAGTCAAAGGATTGTGGCACTGATTGGGTGGCACATTCATATTCTAGTCATGGTCAGGAGCTTTTCTACATAAACGGCAATGTAGTGAACAAGGTTGCTTTCTGTGAGGCTCTCCAATTGTATACTGAAAAGGGGTGTGATGTGAAGGACTACTTGGAAAGTGTCAAATGTGTGACGGAAGTTTCTTTTGTGGATTTTCCTTTAAAGGCAGGGAGGAAACTTCTGAAAACGGATTCAAATAGTGAATCCAAATCGCAAGGAGATTCTAAGCCTCTGTCAGCCCACGTGGTTGGTATTTCTGCAGGGGGAGCTTTGTTTGTATGTTGTCTTGTTCTTTGTCCTTGTTTCTTTAAGAGAAGGAAAACAACTTCTCATGCTGTTCTGAATAAGGAACCCAATTCAATGGATTCAGTTTCCTCCTTCGAAGCCTCCGTTACTGACAAGATTCCGGCCAGTCCACTACGGGTGCCAGCTAGTCCGTCAAGATTCTCAATGTCTCCAAAACTCAGTAGGCTTCAATCACTGCATCTCAATCTGAACCAAGTTGCAAGAGCTACTGATAACTTCTCAGAAACATTGCAAATAGGAGAAGGGGGTTTTGGAACTGTATACAAGGCCAAGTTGGAAGATGGCCTGGTCGTGGCTGTAAAACGTGCAAAAAAGGAACATTTTGATAGTTTGAGAACAGAATTCAGCAATGAAATTCAACTTCTGGCCAAAACTGATCATCGAAACCTGGTGAAGCTACTAGGTTATATTGACAAAGGAAATGAACGCCTTCTTATTACAGAGTTTGTGCCAAATGGTAACCTTAGAGAACATTTGGATGGTATGCGTGGAAAAACACTGGACTTCAATCAGCGACTTGAAATTGCAATTGATGTTGCTCATGGCTTGACCTATTTACATCAGTATGCAGAAAAACAAATTATCCATCGAGACGTGAAATCATCCAACATTCTTCTGACAGAACGCATGCGAGCTAAAGTTGCTGATTTTGGATTTGCAAAGCTAGGGCCTGTAAACACTGATCAGACACACATTTCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGACCCCGAGTATATGAAAACATACCAACTCACTCCCAAAAGTGACGTTTACTCATTTGGAATCTTGCTTTTAGAAATTGTGTCTGGCCGCCGTCCCGTTGAGTTGAAGAAAACTGTTGAAGAGCGTGTTACACTTAGATGGGCCATCAGGAAGTACAACGAAGGAATTGTGGTGGAACTGGTGGATCCTTTAATGGAAGAAGCAGTAAACACAGATGTTCTCATGAAGATGTTTGATTTGGCATTTCAATGTGCAGCACCCATTAGAACAGAGAGACCTGACATGAAATCAGTGAGCGAGCAGTTGTGGGCAATAAGGGCAGATTACCTCAAGAGTGCAGGGAGAGCATAA 1500 0.422 MAISALFLVLLLQFSTIFGSEVVLQSKDCGTDWVAHSYSSHGQELFYINGNVVNKVAFCEALQLYTEKGCDVKDYLESVKCVTEVSFVDFPLKAGRKLLKTDSNSESKSQGDSKPLSAHVVGISAGGALFVCCLVLCPCFFKRRKTTSHAVLNKEPNSMDSVSSFEASVTDKIPASPLRVPASPSRFSMSPKLSRLQSLHLNLNQVARATDNFSETLQIGEGGFGTVYKAKLEDGLVVAVKRAKKEHFDSLRTEFSNEIQLLAKTDHRNLVKLLGYIDKGNERLLITEFVPNGNLREHLDGMRGKTLDFNQRLEIAIDVAHGLTYLHQYAEKQIIHRDVKSSNILLTERMRAKVADFGFAKLGPVNTDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLLEIVSGRRPVELKKTVEERVTLRWAIRKYNEGIVVELVDPLMEEAVNTDVLMKMFDLAFQCAAPIRTERPDMKSVSEQLWAIRADYLKSAGRA 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01170 499 Pfam Protein tyrosine and serine/threonine kinase 218 485 IPR001245 GO:0004672|GO:0006468
Phco8g01170 499 Gene3D Phosphorylase Kinase; domain 1 182 289 - -
Phco8g01170 499 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 185 289 - -
Phco8g01170 499 ProSiteProfiles Protein kinase domain profile. 213 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01170 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 334 346 IPR008271 GO:0004672|GO:0006468
Phco8g01170 499 SMART serkin_6 213 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01170 499 CDD STKc_IRAK 219 485 - -
Phco8g01170 499 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 290 499 - -
Phco8g01170 499 SUPERFAMILY Protein kinase-like (PK-like) 195 488 IPR011009 -
Phco8g01170 499 Gene3D Transferase(Phosphotransferase) domain 1 290 496 - -
Phco8g01170 499 ProSitePatterns Protein kinases ATP-binding region signature. 219 245 IPR017441 GO:0005524
Phco8g01170 499 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 97 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01170 Phco-Chr8 12294472 12297866 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Phco8g01170 PK_Tyr_Ser-Thr 7.1e-51 CL0016