Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01155 ATGGCTCCCAAAACCGTATCCACCAACTACCAAACCACCCGGGTCTTACCCGAACCCGATGTCTTCATACACTGTTCCCAAGGAACACGCATTCCAGCCCACGCTGCCGTTCTGGCTTCGGTGTCGCCGGTTTTGGAGAACTTCATCGATCGGCCACGTAAGCATCGGAGTTCTGAGAAAATAATCCAAATCCAAGGCGTCCCTTGCGACGCCGTCATCGCCTTCGTCGGATTCCTCTACTCCTCCAGGTGCACGGAGGAGGCGATGGACAAGTACGGGATGCACCTGCTCGCATTGTCGCACGTGTACCTGGTGCCGCAGCTGAAACAGAGATGCATCAAGGGTTTGACCCAGCGCTTGACCACAGAGAACGTGGTGGACGTGCTGCAACTCGCGCGCCTCTGCGACGCACCGGATCTTCACCTCCGCTGCATGAAGCTCCTCACCTATAACTTCAAAGCGGTGGAGGCAACGGAGGGATGGAAGTTCCTCGTCAAACACGATCCCTGGCTCGAACTCGACATTCTCAGCTTCATCGACGAACACGAAACGAGGAAGAAGAAATCGAGGAGGTATAGGATGGAGCAGGGTCTGTACGGGGAACTGAGCGAGGCGATGGAGTGTCTGGAACACATATGCGCGGAGGGGTGCACGCACGTTGGACCCTACGATGCGGAGGTGAAGAAAGAGAGGAGGCCCTGTGGCAAATTCTCCACGTGTGAAGGGCTTCAGGTTCTGATCCGCCACTTTGCCACGTGCGAGAAGAAGATGGGCGGTGGCTGCGTCCGCTGCAAACGGATGTGGCAACTCTTTCGACTTCATTCATACGTTTGCCACCAAACAGATCTCTCCTGCAAGGTTCCTTTCTGCAGGCAATTTCAATTGAAGATGCAGCAAGAGAAAAGAAAGGACGATGCTAAGTGGAAACTTTTAGCGAGGAAGGTGACCTCAGCCAAAGTCTTGTCTTCCCTGTCTCTTCCAAAGAGGAAGCGAGATGAGGAGATCGGAGGCACAATAAACAATCCGGGGATTAGAAGCTTTAAATTACTATGA 1053 0.5375 MAPKTVSTNYQTTRVLPEPDVFIHCSQGTRIPAHAAVLASVSPVLENFIDRPRKHRSSEKIIQIQGVPCDAVIAFVGFLYSSRCTEEAMDKYGMHLLALSHVYLVPQLKQRCIKGLTQRLTTENVVDVLQLARLCDAPDLHLRCMKLLTYNFKAVEATEGWKFLVKHDPWLELDILSFIDEHETRKKKSRRYRMEQGLYGELSEAMECLEHICAEGCTHVGPYDAEVKKERRPCGKFSTCEGLQVLIRHFATCEKKMGGGCVRCKRMWQLFRLHSYVCHQTDLSCKVPFCRQFQLKMQQEKRKDDAKWKLLARKVTSAKVLSSLSLPKRKRDEEIGGTINNPGIRSFKLL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01155 350 Gene3D Potassium Channel Kv1.1; Chain A 17 120 IPR011333 -
Phco8g01155 350 Pfam TAZ zinc finger 203 290 IPR000197 -
Phco8g01155 350 SMART TAZ_2 196 291 IPR000197 -
Phco8g01155 350 FunFam BTB/POZ and TAZ domain-containing protein 2 121 191 - -
Phco8g01155 350 SUPERFAMILY POZ domain 20 148 IPR011333 -
Phco8g01155 350 ProSiteProfiles BTB domain profile. 19 88 IPR000210 GO:0005515
Phco8g01155 350 SUPERFAMILY TAZ domain 195 299 IPR035898 -
Phco8g01155 350 Pfam BTB/POZ domain 19 119 IPR000210 GO:0005515
Phco8g01155 350 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 7 332 IPR044513 -
Phco8g01155 350 Gene3D - 121 194 - -
Phco8g01155 350 Gene3D TAZ domain 195 319 IPR035898 -
Phco8g01155 350 FunFam BTB/POZ and TAZ domain-containing protein 2 192 319 - -
Phco8g01155 350 SMART BTB_4 19 120 IPR000210 GO:0005515
Phco8g01155 350 CDD BACK 121 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01155 Phco-Chr8 12130265 12133764 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Phco8g01155 BTB 3.8e-13 CL0033