Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01143 ATGGAGATGGAACGCGTCTTCGAATTTCCTCACACTCACATGGATCGACGCCCGAGAAAGAGAGCACGATTGGGCTGGGACATCCCTGAGGCTCCTAAGGCTCAGGTAGGATTGTTTTGTGGACAAGATGTTGAGACTATTTCCAGCTATGCTCCTTCAAGTGGTCCCTCAGAACATACCACTAGTTCTCTATTTGTTAAGGCAGTTACTCAAAATGGTTCTCCCTCTTGGCGAGACGATGACAAAGATGGACATTACATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAGGATCCATAGCAAAATGGGTGAAGGAACTTTTGGGAAGGTCTTAGAATGTTGGGACAGAGAAAGGAAGGAAATGGTTGCAATAAAAATTATCCGAGGGATAAAGAAGTATCGAGAAGCTGCCATGATAGAAATTGAGGTGTTGCAACAGCTTGGTAAACATGACAAAGGAGGCAATCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTGGCAGACAACTATTGGAATGTATAGCATTCATGCATGACTTGCGGATGATTCATACTGACCTGAAGCCGGAAAACATACTACTAGTGTCGCCAGAGTATGTCAAAGTTCCTGACTACAAGAGCTCATCCAGATCTCCGGGTTCCTATTTCAAGAAGGTTCCCAAATCATGTGCTATAAAGGTTATTGATTTTGGCAGCACCACTTATGAGCGAGAAGATCAGAATTACATAGTATCAACTCGTCATTATAGAGCTCCTGAAGTTATCCTTGGACTTGGCTGGAGCTACCCATGTGATATTTGGAGTGCGGGATGTATATTGGTTGAGTTATGCACGGGCGAAGCTTTATTTCAGACTCATGAAAATTTAGAACATCTTGCAATGATGGAAAGGGTACTTGGTCCATTACCACTGCACATGTTGAAGAGAGTCGACCGACATGCTGAGAAGTATGTTAGAAGGGGTAGATTACACTGGCCTGATGGTGCGACTTCAAGGGAGAGTATCAAAGCTGTAATGAAGCTTCCAAGGCTGCAGAACCTTATAATGCATCATGTAGATCATTCAGCCGGCGATCTCATACATCTCTTGCAGGGGTTACTTAGATTTGACCCTTCTGAAAGACTTACAGCCAAGGAAGCTCTTAGACACTCCTTCTTTATGAGAGATCACTTTAGGAGATAA 1293 0.4285 MEMERVFEFPHTHMDRRPRKRARLGWDIPEAPKAQVGLFCGQDVETISSYAPSSGPSEHTTSSLFVKAVTQNGSPSWRDDDKDGHYMFALGENLTSRYRIHSKMGEGTFGKVLECWDRERKEMVAIKIIRGIKKYREAAMIEIEVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECIAFMHDLRMIHTDLKPENILLVSPEYVKVPDYKSSSRSPGSYFKKVPKSCAIKVIDFGSTTYEREDQNYIVSTRHYRAPEVILGLGWSYPCDIWSAGCILVELCTGEALFQTHENLEHLAMMERVLGPLPLHMLKRVDRHAEKYVRRGRLHWPDGATSRESIKAVMKLPRLQNLIMHHVDHSAGDLIHLLQGLLRFDPSERLTAKEALRHSFFMRDHFRR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01143 430 FunFam Serine/threonine-protein kinase AFC2 85 178 - -
Phco8g01143 430 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 426 - -
Phco8g01143 430 Gene3D Transferase(Phosphotransferase) domain 1 152 423 - -
Phco8g01143 430 FunFam Serine/threonine-protein kinase AFC2 174 423 - -
Phco8g01143 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Phco8g01143 430 Pfam Protein kinase domain 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01143 430 CDD PKc_CLK 85 423 - -
Phco8g01143 430 SMART serkin_6 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01143 430 Gene3D Phosphorylase Kinase; domain 1 85 178 - -
Phco8g01143 430 SUPERFAMILY Protein kinase-like (PK-like) 85 427 IPR011009 -
Phco8g01143 430 ProSiteProfiles Protein kinase domain profile. 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01143 Phco-Chr8 12044791 12048075 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Phco8g01143 Pkinase 7.1e-50 CL0016