Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01123 ATGTCTCCTTCCAAAATCCCCGTCGCCGGGGAATTTTCATTTTCCGGCATGTGGTTGGTTATTCTTCTTCTTCACTTCGCTCTCTTTGCGACTCCTTCTCTTTGCTTGGACTTCCTATTCAACTCCTTCACCGGCATCACCAACCTCACTCTGGTCAAAGACGCTCGCGTGGACGCCTCGGTGATCCGCATGACCAACGACTCTAACCAGTACTCTTACGGCCGCGCCTTCTATCCCACAAAAGTTCCCATCACAAAACCGTCTTCCAATTCCTCATCCCCTTCCATTACTTCATTCTCCACTTCTTTTGTCTTCTCCGTCTTGCCGGAAATTACTACCAGTCCCGGCTTTGGCCTCGCCTTCGTCCTCTGCAACACCACCGACCCTCCCGGAGCTATCGCCAGCCAGTACTTCGGTCTATTCACCAACGCCACCTCCCCCACCTATTTCCCCCTGGTCGCCGTCGAATTCGACACCGGCCAGAACCCCGAGTTCAACGACATCAACGATAACCACATCGGCATCGACCTCAACAACATCGAGTCCACCATCGCCACCCCCGCCGGCTACTACAATTCCACCGGGGGGTTCGTGCCAGTCCGCATGCGCACCGGCCAGAATATCCGAGCCTGGATCGATTTTGACGGCCAGAATCTGGTGTTCAACGTAACGGTCGCGCCAATCGGCGTTTCCCGCCCGTTGAAGCCTACGCTTTCTCATTATGTTCCCACCATAGGTAACTACGTGTCAGCTGACATGTACGTCGGGTTTTCCGCTTCGAAGACGAACTGGATCGAGGCGCAGAGGGTTCTGGCGTGGAGCTTCAGCGATTCAGGGCCAGCGAGGGAGCTGAACACAACAAACTTACCGGTGTTCGAACCGGAACCATCGTCTTCCTCGCTTTCTAGTGGCGCAATAGCGGGGATTGTTGTTGGTTGTGTTGTTTTTGTGGTTATATGCGGTTGTGGTTTTTACTTGTGGTGGCGAATCCAGAAAGGGAAAGACGAAGAAGACGATGAGATCGAAGATTGGGAGTTGGAGTACTGGCCGCATAGATTCTCGTACGAGGAATTGAGTTCTGCAACAGGGGAATTTGGGAAGGAGCAGCTGTTAGGTTCGGGAGGGTTCGGGAGAGTGTACAAAGGGACGTTGCCGAACAAGACACAGATGGCGGTGAAGTGTGTGAACCACGATTCGAAGCAAGGGTTACGGGAATTCATGGCGGAGATATCGAGTATGGGGAGGCTTCAACACAAGAACCTGGTTCAAATGCGAGGGTGGTGTAGAAAGGGTAACGAGCTTATGCTTGTTTATGATTACATGCCTAATGGGAGTCTGAACAGGTGGGTTTTCGATCGCCCCGAGAAGCTTCTAGGGTGGGAGCAACGTCGTCGTATCCTTGTCGACGTGGCAGAGGGGCTTGCATACCTTCACCACGGTTGGGACCAGGTTGTTATTCACCGAGATATTAAGTCCAGTAACATATTGTTGGACGCCGACATGCGAGGGAGACTCGGGGACTTTGGTTTGGCCAAGCTTTACACGCACGGGGAAGTTCCCAACACCACGCGTGTGGTGGGGACGTTGGGCTACTTGGCGCCCGAGCTGGCCACGGTTGCGGCGCCGACGTCCGCGAGTGACGTCTACAGCTTTGGGGTGGTGCTGTTGGAGGTGGCGTGCGGGAGGCGGCCCATTGAGACTTCGGTGGTGGAGGAGGAGGTGGTGCTCATTGATTGGGTGAGGGAGTTGTACGCGAAGGGGTGCGCGCGTGAGGCTGCCGATGCGAGGATCGGAGGGGAGTACGATGAGGGAGAAATGGAGATGGTTTTGAAGCTTGGCTTGGCTTGTTGCCACCCTGACCCCCAGAGGAGACCCACCATGAAGGAAGTCGTCGCGCTTCTCCTCGGAGAGAATACGCCGGAGGCGCCCGGAAAAGTCTTGTCCGAATTGGTTCGCGGCGGCGACGATTTCGATGAGGCGGCGCCTTCGCAAACCTCCTCCACCCGGGTTTGA 2013 0.5524 MSPSKIPVAGEFSFSGMWLVILLLHFALFATPSLCLDFLFNSFTGITNLTLVKDARVDASVIRMTNDSNQYSYGRAFYPTKVPITKPSSNSSSPSITSFSTSFVFSVLPEITTSPGFGLAFVLCNTTDPPGAIASQYFGLFTNATSPTYFPLVAVEFDTGQNPEFNDINDNHIGIDLNNIESTIATPAGYYNSTGGFVPVRMRTGQNIRAWIDFDGQNLVFNVTVAPIGVSRPLKPTLSHYVPTIGNYVSADMYVGFSASKTNWIEAQRVLAWSFSDSGPARELNTTNLPVFEPEPSSSSLSSGAIAGIVVGCVVFVVICGCGFYLWWRIQKGKDEEDDEIEDWELEYWPHRFSYEELSSATGEFGKEQLLGSGGFGRVYKGTLPNKTQMAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNRWVFDRPEKLLGWEQRRRILVDVAEGLAYLHHGWDQVVIHRDIKSSNILLDADMRGRLGDFGLAKLYTHGEVPNTTRVVGTLGYLAPELATVAAPTSASDVYSFGVVLLEVACGRRPIETSVVEEEVVLIDWVRELYAKGCAREAADARIGGEYDEGEMEMVLKLGLACCHPDPQRRPTMKEVVALLLGENTPEAPGKVLSELVRGGDDFDEAAPSQTSSTRV 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01123 670 FunFam L-type lectin-domain containing receptor kinase S.4 34 283 - -
Phco8g01123 670 CDD STKc_IRAK 371 634 - -
Phco8g01123 670 Pfam Legume lectin domain 36 289 IPR001220 GO:0030246
Phco8g01123 670 PANTHER - 53 638 - -
Phco8g01123 670 ProSiteProfiles Protein kinase domain profile. 365 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01123 670 SUPERFAMILY Protein kinase-like (PK-like) 346 634 IPR011009 -
Phco8g01123 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Phco8g01123 670 Gene3D - 35 291 - -
Phco8g01123 670 SMART serkin_6 365 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01123 670 FunFam L-type lectin-domain containing receptor kinase S.1 350 440 - -
Phco8g01123 670 Gene3D Phosphorylase Kinase; domain 1 350 440 - -
Phco8g01123 670 ProSitePatterns Legume lectins beta-chain signature. 153 159 IPR019825 -
Phco8g01123 670 Gene3D Transferase(Phosphotransferase) domain 1 441 645 - -
Phco8g01123 670 Pfam Protein kinase domain 367 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01123 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 292 IPR013320 -
Phco8g01123 670 CDD lectin_legume_LecRK_Arcelin_ConA 36 279 IPR001220 GO:0030246
Phco8g01123 670 FunFam L-type lectin-domain containing receptor kinase S.4 441 645 - -
Phco8g01123 670 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01123 Phco-Chr8 11844432 11846444 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco8g01123 Pkinase 4.9e-51 CL0016