Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01112 ATGCTGAGTGCTCCATCCTTTAACAAATCTGAGCCTGATACCTCTCGTTGGCTTAGGCTACTTTGTCTCTCGGGAGGAAAAAAGAGAACAGCTTCCGAAGGACCTCCAACAAGGGAAAAAAGGCAAATGGCATCATCCAGCTCTTACAATTCTCCATGTGCTGCCTGCAAATTCTTGAGGAGGAAATGCATGCCAGGATGCATCTTTGCGCCTTACTTCCCACCCGAAGAGCCTCAAAAATTCGCAAACGTCCACAAAATTTTTGGTGCAAGCAATGTGACCAAACTCCTCAACGAACTCCTCCCTCAGCAGAGGGAGGATGCAGTGAACTCACTCGCATATGAAGCAGAGGCACGCGTGAGGGACCCAGTTTATGGCTGCGTAGGAGCCATCTCTTTCCTGCAAAGACAAGTTCAAAGGCTCCAAAAGGAGCTTGATGCTGCAAACGCTGATCTGCTACGCTACTCTTACACTGACATCCCTCCAGCATCTCTTTCTGTGCCACCAGGACTTGCTTCATTTCAACACATGCCCCAAAGGCAGTTTACTGCAAGATTTGGTAACGAAACTGGGTTTTATCGACAATCTGCTACTGCTGCTTATTCCTTCCCTTATGCAGTTCCTTGGACTGATACCTCTTCGGAGGACATCAGTGAGGGAGGAGGGGGAGGAGATGGCGTGGTGATATTATATATGTCTATTATGGACTCTTGGCTATGTAGCCTTAGTTGGACTCTTCTAGCTAGGCTTGCCCTACGAAACTGTTGCTATCAACCACCAACACCACCTCCACCTCCAGACAATTCTGTGAAACAGCAAATGTTAGTTTGCAATTTGGCAGGTAAAATTCTGATCCGATCCTGTTTTGTCAGTCACTTTATTACTCCCTCTCTCAGCACACAGCACACAGACACTGTTACACTCATTAAAATCAAGAAAAGTCAGAAGCCTCATACCCCTCCCCCCCCCCCCTCCCCCCCAAAGAATATGAATGGGTATGAGGGACACGAGGGCGTTCTCAGCGAGAGAGTCACGTCCATATGA 1044 0.4799 MLSAPSFNKSEPDTSRWLRLLCLSGGKKRTASEGPPTREKRQMASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPQQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYSYTDIPPASLSVPPGLASFQHMPQRQFTARFGNETGFYRQSATAAYSFPYAVPWTDTSSEDISEGGGGGDGVVILYMSIMDSWLCSLSWTLLARLALRNCCYQPPTPPPPPDNSVKQQMLVCNLAGKILIRSCFVSHFITPSLSTQHTDTVTLIKIKKSQKPHTPPPPPSPPKNMNGYEGHEGVLSERVTSI 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01112 347 ProSiteProfiles LOB domain profile. 51 152 IPR004883 -
Phco8g01112 347 MobiDBLite consensus disorder prediction 312 347 - -
Phco8g01112 347 Pfam Lateral organ boundaries (LOB) domain 52 149 IPR004883 -
Phco8g01112 347 Coils Coil 131 151 - -
Phco8g01112 347 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 50 206 - -
Phco8g01112 347 MobiDBLite consensus disorder prediction 28 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01112 Phco-Chr8 11699221 11703197 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco8g01112 LOB 1.3e-41 No_clan