Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01077 ATGGGGTTTTCCTCTCTCCACGTCTGCATGAACTCATCAGAACAATGGCTGCAGGGCACAATTCACGAAGAGTGTGGGGTGGATTCTTCTTCACCATCAGGCGACATGCTTCCATGCTCGAGACCGATGACAGAGAGGAGACTAAGACCCTCACAAGATCAAGCCCTCAAGTGCCCTAGGTGTGAATCAACACACACCAAGTTCTGCTACTACAATAACTACAGTCTCACTCAGCCCAGGTACTTCTGCAAGACATGTAGGAGGTACTGGACCAAAGGAGGCACCCTTAGGAACATTCCTGTTGGAGGTGGTTGCAGAAAGAACAAGAAAGTTTCTACTAAGAAACATAATGACCACCAACCAGCTATTAATCAAAACCAAACACAACCTGCAGGACCCTCTTATATTCATAATCATAAAGATCTTCAACATTCCTTCTTGGATGTGCAGTTTTCCCACCTCAACAATTTACTTGGGACTAATGCTGGGTTACTGGGAAACCCTAATTTCATGGATAGTAAGTATAGCATGGGAATGCTAGAGAACCCTGGGCCTATTGACTTCATGGAAAGCGGGTTGGATGGTATGAATATGATTGGGGGTTCTACTAGGAGTTTGGATCTTCTTGAAAATAGTGATATGAGTGTGGGTGGTGGCGTTGGGCTTGGTGATATGAGTGGCGCCTACAATGGGTTACCATTGAATTATCAAGGTCTTTCTACTGCAGCATTTGGTGGAGGCATGTCCCTTGATGGAAGCATCAGCAATATTGGAACTTATATAATGGACTCTTGCCAGCGACTTATGTTGCCCTATGAGGGAGGTCATAACATCCTTAACGGTTCAATTGATGTGAAGCCAAACCCTAAGCTGTTGTCCCTTGAATGGCATGATCAGGGTTGCTCTGATGCTGAAAAAGTGTCATTGGGATATCTTAATGGAGGATCATGGAGCGGCTATGGATCTTCCACAACAAACCCTTTGGTCTAG 990 0.4515 MGFSSLHVCMNSSEQWLQGTIHEECGVDSSSPSGDMLPCSRPMTERRLRPSQDQALKCPRCESTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSTKKHNDHQPAINQNQTQPAGPSYIHNHKDLQHSFLDVQFSHLNNLLGTNAGLLGNPNFMDSKYSMGMLENPGPIDFMESGLDGMNMIGGSTRSLDLLENSDMSVGGGVGLGDMSGAYNGLPLNYQGLSTAAFGGGMSLDGSISNIGTYIMDSCQRLMLPYEGGHNILNGSIDVKPNPKLLSLEWHDQGCSDAEKVSLGYLNGGSWSGYGSSTTNPLV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01077 329 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 42 156 IPR045174 GO:0003700|GO:0006355
Phco8g01077 329 Pfam Dof domain, zinc finger 53 110 IPR003851 GO:0003677|GO:0006355
Phco8g01077 329 ProSitePatterns Zinc finger Dof-type signature. 58 94 IPR003851 GO:0003677|GO:0006355
Phco8g01077 329 MobiDBLite consensus disorder prediction 106 131 - -
Phco8g01077 329 ProSiteProfiles Zinc finger Dof-type profile. 56 110 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01077 Phco-Chr8 11376000 11377485 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco8g01077 zf-Dof 4.1e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01071 4 8609068 8610078 Phco8g01077 8 11376000 11377485 PCT