Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01071 ATGGAAGCTTATGAGAACGAATCTAAGAAGGGGTTCTGGAATGCGGAGGAAGACTTGGTTCTAACTAATTACATAAAAAAGCATGGAACTGGGAAGTGGAACCGGATTCCTAGAGTGACAGGGTTGAAGAGAAGCGGCAAAAGTTGCAGACTGAGATGGATGAATTATCTAACTCCTGATGTTAAGCGTGGAGATTTCTCAGAAGAAGAAGAAGACCTTGTTGTTCGGCTTCACAGTCTCCTTGGAAATAGGTGGTCTTTGATCGCGGGGAGGATTCCGGGGAGAACAGACAACCAAGTGAAGAACTTTTGGAACACTCATTTAAGCAAGAAGTTTGGTGTCGATAAGAAGAAAAGGAGAAGAGGTTGTGTGAGAGCAAAATATGTCCCTAGAGCTGAAGCAGAGGGTAATTGCAACAGTGCAACAAAGGGAATGAATGGTGAAGGTGATAAGCTTGTTCATGAAAGTTGGAGCGATGATCTAATGGACTTGGCAAGCATGAGGCGATTATGA 513 0.4366 MEAYENESKKGFWNAEEDLVLTNYIKKHGTGKWNRIPRVTGLKRSGKSCRLRWMNYLTPDVKRGDFSEEEEDLVVRLHSLLGNRWSLIAGRIPGRTDNQVKNFWNTHLSKKFGVDKKKRRRGCVRAKYVPRAEAEGNCNSATKGMNGEGDKLVHESWSDDLMDLASMRRL 170
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01071 170 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 131 - -
Phco8g01071 170 Gene3D - 10 62 - -
Phco8g01071 170 Pfam Myb-like DNA-binding domain 11 57 IPR001005 -
Phco8g01071 170 Pfam Myb-like DNA-binding domain 63 108 IPR001005 -
Phco8g01071 170 FunFam MYB-related transcription factor 9 62 - -
Phco8g01071 170 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Phco8g01071 170 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 57 IPR017930 -
Phco8g01071 170 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Phco8g01071 170 SMART sant 62 110 IPR001005 -
Phco8g01071 170 SMART sant 9 59 IPR001005 -
Phco8g01071 170 CDD SANT 13 57 IPR001005 -
Phco8g01071 170 CDD SANT 66 108 IPR001005 -
Phco8g01071 170 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Phco8g01071 170 Gene3D - 64 129 - -
Phco8g01071 170 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco8g01071 Phco-Chr8 11304789 11305473 Dispersed/Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco8g01071 Myb_DNA-binding 3.7e-13 CL0123