Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01070 ATGAAGAACTTGTACTGGTTTAAAGAAATTTCTAACAACGTGAGATCAGGGAGAAGGCTTTCACTTGGGGAATACAAGCGAGCAGTGTCATGGTCCAAGTATTTGATTTCTTCAGGGGCAGCCATAAAGGGAGAGGCTGAAGAAGAATGGAGTGCTGATCTGTCTCAGTTGTTCATTGGCTCCAAATTTGCTTCTGGCAGGCATAGCAGGATCTACAGAGGCATCTACAAGCACATGGATGTTGCAATCAAGCTGGTGAGTCAACCGGAGGAGGATGAGGACTTGGCTGTTTCGCTAGAGAAGCAATTCACTTCTGAGGTTGCTTTGCTCTTTCGATTGCGCCATCCAAATATCATTACCTTTGTTGCAGCTTGCAAGAAACCTCCCGTCTTCTGTATTATTACTGAATATTTGTCTGGGGGTTCCTTGAGAAAATACTTGATTCAGGAAGGACCACATTCAGTTCCTCACAACCTTGTTCTGAAATTAGCCTTAGACATTGCTCGGGGAATGCAATATCTTCATTCTCAGGGAATACTTCACAGGGATCTCAAATCAGAAAATCTGCTGTTGGGGGAAGATTTGTGCGCAAAAGTAGCAGATTTTGGGATCTCATGCTTGGAATCTCAGACCGGTAGTGCAAAAGGATTCACTGGAACATACCGTTGGATGGCACCTGAAATGATCAAAGAAAAGCGTCACACCAAAAAAGTAGATGTCTATAGTTTCGCCATAGTTCTGTGGGAACTCTTAACTGGATTGACCCCATTTGACAACATGACACCAGAGCAGGCAGCATATGCAGTGACTCACAAGAATGAAAGGCCTCCGTTACCATGCGAGTGTCCACGCGCATTTAGTCATATCATAAACAGATGCTGGTCAAGCAATCCAGATAAACGACCACATTTTGATGAGATAGTTGCAATTTTGGAGAGCTACAGTGAAGCACTTGAGGAGGATCCACAATTTCTAACCACTTACAAACCACGTCCTAATAATCTTATTCTCAGATGCTTACCAAAATGTAATTCTACTCCCAATATATCTGCTTCTTGCAAACCTTAA 1068 0.4307 MKNLYWFKEISNNVRSGRRLSLGEYKRAVSWSKYLISSGAAIKGEAEEEWSADLSQLFIGSKFASGRHSRIYRGIYKHMDVAIKLVSQPEEDEDLAVSLEKQFTSEVALLFRLRHPNIITFVAACKKPPVFCIITEYLSGGSLRKYLIQEGPHSVPHNLVLKLALDIARGMQYLHSQGILHRDLKSENLLLGEDLCAKVADFGISCLESQTGSAKGFTGTYRWMAPEMIKEKRHTKKVDVYSFAIVLWELLTGLTPFDNMTPEQAAYAVTHKNERPPLPCECPRAFSHIINRCWSSNPDKRPHFDEIVAILESYSEALEEDPQFLTTYKPRPNNLILRCLPKCNSTPNISASCKP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01070 355 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01070 355 Pfam Protein tyrosine and serine/threonine kinase 59 310 IPR001245 GO:0004672|GO:0006468
Phco8g01070 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Phco8g01070 355 CDD STKc_MAP3K-like 64 311 - -
Phco8g01070 355 FunFam Serine/threonine-protein kinase isoform 1 47 139 - -
Phco8g01070 355 SUPERFAMILY Protein kinase-like (PK-like) 45 311 IPR011009 -
Phco8g01070 355 Gene3D Phosphorylase Kinase; domain 1 46 139 - -
Phco8g01070 355 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01070 355 Gene3D Transferase(Phosphotransferase) domain 1 140 334 - -
Phco8g01070 355 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 50 316 - -
Phco8g01070 355 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Phco8g01070 355 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Phco8g01070 355 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Phco8g01070 355 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Phco8g01070 355 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01070 Phco-Chr8 11293600 11295970 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phco8g01070 PK_Tyr_Ser-Thr 1e-63 CL0016