Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01066 ATGAAGAACACAAACACTACTATTACTGCTTCATCAAAACCTGATCGCAAAACTATTGAAAGAAACCGCAGAATCCACATGAAAGGTCTCTGCTTCAAGCTTGTTTCCATTATTCCTTCCAAGTACCTCAAACCCACCAAGGACATGCTTTCCCAGCAGGATCAGCTTGATCTTGCAGCCACGTATATAAAGCATCTGAGAGAAAGAATAGAGAAACTGAAGGGGGAGAAGGAGCAAGCCATGAACATGATGAGAACAACCCAAACCAATAACGAGATTTTCAATGTTGAGTCTCAGGTGCCTATACTTGAGATAAAGGAGTTGGGTTCGGGCATCGAAGTGATGTTGATAAGTGGAGTGAATAAGAACTTTATGCTCTATGAAGTAATTAGTGTCCTTGAGGAAGAGGGTGCTGAAGTGGTCGCTGCCAACTTCTCTACTGTTGCTAATAAGATATTTTACACAGTTCATGCTAAGGTTAAAATATCAAGAGTTGGCGTTGAGTCAACTAGGGTATATCAAAGGCTTCAGGAATTGATTGAACCACTAGAAGCTGGTGGTACATATCGTGACCGAAAGCAAAATTATTAA 591 0.4078 MKNTNTTITASSKPDRKTIERNRRIHMKGLCFKLVSIIPSKYLKPTKDMLSQQDQLDLAATYIKHLRERIEKLKGEKEQAMNMMRTTQTNNEIFNVESQVPILEIKELGSGIEVMLISGVNKNFMLYEVISVLEEEGAEVVAANFSTVANKIFYTVHAKVKISRVGVESTRVYQRLQELIEPLEAGGTYRDRKQNY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01066 196 Pfam Helix-loop-helix DNA-binding domain 17 67 IPR011598 GO:0046983
Phco8g01066 196 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 17 81 IPR036638 GO:0046983
Phco8g01066 196 FunFam Transcription factor bHLH162 3 94 - -
Phco8g01066 196 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 11 66 IPR011598 GO:0046983
Phco8g01066 196 Coils Coil 63 90 - -
Phco8g01066 196 Gene3D - 3 97 IPR036638 GO:0046983
Phco8g01066 196 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 6 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01066 Phco-Chr8 11238919 11239803 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phco8g01066 HLH 7.1e-06 No_clan