Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01065 ATGAAGGAAAGCAGTGATGGGTTTGTGAGAGCCGATCAGATTGATCTGAAGAGCATAGATGAACAGTTGGAGAGGCACCTCAACAAGGTGCTCACCATAGACAAGAAAAAGCGCTCTGATGAGGAGGAAGATGCTGATCAGGTTCATGTTCACACCAGTGCCACTGCCTCTCCCAAATTCAGACCCGCCTCTGCTAGGCTAAGCTTGAAGAAGCAGAAGCAAGAGTGGGAGATTGATCCTTCTAAACTCATCATCAAGAGTGTCATAGCTCGTGGCACTTTTGGCACTGTCCATCGTGGTATCTATGATACCCAAGATGTTGCTGTGAAATTGTTGGACTGGGGTGAAGAAGGACAAAGGACAGAAGCAGAAATTGCTTCCCTGAGGGCAGCCTTCACACAGGAAGTTGTTGTTTGGCATAAACTTGATCATCCCAATGTTACAAAGTTTATAGGAGCAACAATGGGGTCTTCAGAATTGCAGATACAAACTGATAATGGTCTAATTGGCATGCCAAGCAATGTCTGTTGTGTTGTTGTGGAGTATCTTGCTGGAGGAAATCTGAAATCATACCTAATAAAGAACAGGAGGAGGAAGCTAGCTTTTAAGATTGTCATTCAGCTGGCACTTGATCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAGAAGATTGTCCATAGAGATGTTAAGACAGAGAACATGCTTTTGGATAAGACACGCACAGTTAAAATTGCTGATTTTGGGGTTGCACGTGTTGAGGCATCAAATCCTAACGATATGACTGGGGAGACTGGTACTCTTGGTTATATGGCTCCAGAGGTTTTAAACGGCAACCCCTATAACAGGAAATGTGATGTGTACAGTTTTGGCATCTGTTTATGGGAAATATATTGTTGTGACATGCCATATCCTGACCTAAGTTTCTCAGAAATTACATCAGCTGTTGTTCGCCAGAATTTAAGACCAGAAATGCCAAGATGTTGCCCAAGTTCTCTGGCAAATGTAATGAAGAAATGCTGGGATGCCACTCCAGATAAGCGGCCAGAGATGGATGAGGTAGTTTCCATGCTGGAGGCCATTGACACAACCAAAGGTGGAGGTATGATCCCCCATGATCAGCAGCAGGGTTGTTTTTGCTTCCGCAAGCATAGAGGGCCTTGA 1161 0.4453 MKESSDGFVRADQIDLKSIDEQLERHLNKVLTIDKKKRSDEEEDADQVHVHTSATASPKFRPASARLSLKKQKQEWEIDPSKLIIKSVIARGTFGTVHRGIYDTQDVAVKLLDWGEEGQRTEAEIASLRAAFTQEVVVWHKLDHPNVTKFIGATMGSSELQIQTDNGLIGMPSNVCCVVVEYLAGGNLKSYLIKNRRRKLAFKIVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNLRPEMPRCCPSSLANVMKKCWDATPDKRPEMDEVVSMLEAIDTTKGGGMIPHDQQQGCFCFRKHRGP 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01065 386 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01065 386 SUPERFAMILY Protein kinase-like (PK-like) 61 357 IPR011009 -
Phco8g01065 386 Pfam Protein tyrosine and serine/threonine kinase 85 357 IPR001245 GO:0004672|GO:0006468
Phco8g01065 386 Gene3D Phosphorylase Kinase; domain 1 71 166 - -
Phco8g01065 386 CDD STKc_MAP3K-like 89 357 - -
Phco8g01065 386 PRINTS Tyrosine kinase catalytic domain signature 284 306 IPR001245 GO:0004672|GO:0006468
Phco8g01065 386 PRINTS Tyrosine kinase catalytic domain signature 180 193 IPR001245 GO:0004672|GO:0006468
Phco8g01065 386 PRINTS Tyrosine kinase catalytic domain signature 218 236 IPR001245 GO:0004672|GO:0006468
Phco8g01065 386 PRINTS Tyrosine kinase catalytic domain signature 328 350 IPR001245 GO:0004672|GO:0006468
Phco8g01065 386 MobiDBLite consensus disorder prediction 32 63 - -
Phco8g01065 386 SMART serkin_6 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01065 386 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 52 360 - -
Phco8g01065 386 FunFam Kinase suppressor of Ras 1 72 167 - -
Phco8g01065 386 FunFam Serine/threonine-protein kinase HT1 183 368 - -
Phco8g01065 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Phco8g01065 386 Gene3D Transferase(Phosphotransferase) domain 1 184 375 - -
Phco8g01065 386 MobiDBLite consensus disorder prediction 32 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01065 Phco-Chr8 11215944 11219752 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phco8g01065 PK_Tyr_Ser-Thr 9.3e-64 CL0016