Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01048 ATGGATTGGGTTCGAGGAGACGCAGTGGGTCAAGGAAACTTCGCCACCGTTAGTCTAGTGATTCCGACTAACAATCCCTCTCAGTTTCCGTCTTTAACCGCAGTCAAGTCCTCCCAACCACTCACCTCGTGTTGGCTCAGGAACGAGAAGCACGTGCTTGATCGCCTAGGTTCGTGTCCAAGGATCATTCGCTGCTTTGGAGACGACTACAGTTTTGAGAATGGTGTTGAGTACTACAATTTGTTCCTTGAATACGCTGCCGCTGGGAGTCTCGCAGATGAGGTAAACAATTGCGGTGGCCGGATTCCCGAGCCTGAAGTTCGGCGTTACACGAGGTCCATCGTGGAAGGTTTGAATCACGTGCATCAAAACGGGTTTGTCCACTGCGACATAAAGCTGCAAAACATCCTCGTATTTGACGGCGGGGAAATCAAGATTGCGGATTTCGGTCTGGCGAAGGAGGCAGGAGAGAGAAAACAGAGGAAGAGTGAATGCAGGGGGACTCCGCTGTTTATGTCCCCGGAGCAAGTAATCGATGGAGAGTGTGAGTCGCCGGCAGACATATGGGCTCTGGGATGCGCCGTTGTGCAGATGGTGACCGGGAAGCCGGCGTGGAAGGTGGAGAAAGGGTCGAGTATGTGGTCGTTGATGCTTCGAATTGGGGTGGGAGAAGAAAGTCCCGAGATACCTGAGAATTTGTCGAAAGAAGGGAAGGATTTTATCGAGAAGTGTTTTGTTAAGGATCCTAGAATGAGGTGGAGTGCAGAGATGCTTTTAAAGCACCCTTTTGTTTCTGATGACACTGTTTCATTTAAGGGCGTTCACGAATCGCCCAGAAGTCACTTCGATTTCCCCGACTGGGTTTCTAGTGCGACGTCTTCACTTCCTTGTTCGCCAGAATCTCAATCGCCGTGGAATTTTGACGAGTCCCGATTGGAAGGTTTCTGCTCGCCGGAGGACCGGCTCCGTCAGATATCGACGGTTAATCGGCCGGCGAATTGGTCGGAATCAGATGGTTGGAATAGTGTGAGGTGA 1035 0.5121 MDWVRGDAVGQGNFATVSLVIPTNNPSQFPSLTAVKSSQPLTSCWLRNEKHVLDRLGSCPRIIRCFGDDYSFENGVEYYNLFLEYAAAGSLADEVNNCGGRIPEPEVRRYTRSIVEGLNHVHQNGFVHCDIKLQNILVFDGGEIKIADFGLAKEAGERKQRKSECRGTPLFMSPEQVIDGECESPADIWALGCAVVQMVTGKPAWKVEKGSSMWSLMLRIGVGEESPEIPENLSKEGKDFIEKCFVKDPRMRWSAEMLLKHPFVSDDTVSFKGVHESPRSHFDFPDWVSSATSSLPCSPESQSPWNFDESRLEGFCSPEDRLRQISTVNRPANWSESDGWNSVR 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01048 344 SUPERFAMILY Protein kinase-like (PK-like) 3 302 IPR011009 -
Phco8g01048 344 Gene3D Transferase(Phosphotransferase) domain 1 2 295 - -
Phco8g01048 344 ProSiteProfiles Protein kinase domain profile. 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01048 344 CDD STKc_MAPKKK 2 264 - -
Phco8g01048 344 SMART serkin_6 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01048 344 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Phco8g01048 344 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 296 - -
Phco8g01048 344 FunFam Mitogen-activated protein kinase kinase kinase 17 2 291 - -
Phco8g01048 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Phco8g01048 344 Pfam Protein kinase domain 6 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01048 Phco-Chr8 10990809 10991843 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco8g01048 Pkinase 4.2e-52 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01048 8 10990809 10991843 Phco8g01048 8 10990809 10991843 ECH