Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01002 ATGCAAATATCACACCCCAAACTAAGCCCAGATCACCACCTTTCCATGGAGATTCCTAAGCTCCACATAATTCAACACTCTCGCTGTATAGCACTTCTTTTCCTTCTTCAGTTCTCATCACTGCACTTCCCCTCACTCGGCGGCTACAACGTCCCAGATAAGTACTTTATCAATTGTGGGTCAGACAACAGTGTTAACGAAAGTGGCAAGGTTTACGTTGCTGAGTCAACACTTGAAGCCAGTTTTAGCAGCAGTAACACAGAAAAGAATCAGTCATCGGTGTCATCTCCTCTTTACCAAACAGCAAGGATTTTTCGAAGGGAATCTTGGTACAAGTTCAACATCGATTTAAATGGCACCTACCTGCTACGCCTCCATTTCTTCCCTTTCTCTTCGCCCGGTAATCTTTCCTCGGCCAGGTTCAACGTTTCAGTCCCTCGTTTCTGGTTGTTGGAAAATTTTGATGGTACAAATGATACCAATAACAACTCTGCTTTAGTTAAAGAGTTTTTCATGGAGATCAGAACCCCCACCTTCAAAATAACTTTCAGACCTCTGGAGTCATCGTTTGCGTTTGTGAATGCCATAGAACTGTTCGTACTACCCCTCCATCTGATATCTGACAAGGTGTCGTTTTTCAAACCTATTGGGGGTACATCTTCTTATAGCGGAGGTTTGTACTCTCGGGTGTTGGAGACCAAACATAGGCTTAATGTTGGTGGTCAAACTACCAAAGATATCTTATTGAGAAACTGGATTCCAGATGATATTTATCTAATGTATAAAGAAAACGCCAAGAATCGTTCCCCTTACCAGGGTATCGAGTACCACGTAGATGATTACTCCGATGGTCCAAACGCAACTAGATATACTGCGCCAACTGAGGTGTACGGAACTGCTAAGGAGAGTAACCTCTCTGCCAATGCCACAAACTTTGGACTTTTCAACATAACATGGGCTCTTCCGGTGGACAACAAAACCGATCATTTCCTTCGGCTTCACTTCTGTGACTATATCAATCGATACTTTAACCTTACATACTTCGAACTTTCCATTTATGACGCCCTTGTCATGCAGGTAAATAGTGACGAAAACGTGTCTAACGTGTTGCCTGCCCCTTATTATTATGATTTCGTGGTGAACTCTGATGACTCTGGACATATTAAGGTCAGCCTAACACCTAATGGAACCGCTTTAAATCGAAGTGCATTTTTAAACGGGCTAGAAATAATGAAAGTGATTGGATCATCAGATTCTGTCCCCCGTGACGAAGAATCCGATTCCAATCATCTTCGTCTTCCTGTGTTGCTGGGTTCAGTTCTCGGTGGTTTAGTCTTGGCTTTTGTTGTGGTGCTACTTGGCTTTCTTTGGCGTTTTAAAATGAGCAAGGAAAAGCCCGTTGAGAATTCGGACTGGTTGCCAATCCCCGTTAATGCTGGTGGAAGTTCTCACAGCAGATTGACTGATATAACCAGTCACGGCTCTCCCCTTCCCAACATAAACCTAGGGCTCAAAATTCCCTTGATTGATCTTCAACTTGCAACAAAGAATTTCCACGAAAGTCAGCTGATTGGTAAGGGTGGTTTTGGCAACGTCTACAAGGGAGTCCTCAAGAATGGCATGACAGTGGCTGTGAAAAGAAGCCAGCCAGGGTCAGGTCAAGGCCTTCCAGAATTTCAGACAGAGATTATGGTTTTGTCCAAGATTCGCCACAGGCACCTTGTTTCCTTAATTGGGTATTGTGATGAGAGGTTCGAAATGATTCTGGTCTATGAATACATGGAAAAAGGGACACTAAGGGACCACTTGTATAACACAAAGTTGCCATGCTTGTCCTGGAAGGTGAGGCTTCAAATTTGCATTGATTCGGCCAGGGGTCTTCATTACCTTCACAAAGGAGCATCTGGGGGAATCATTCACCGTGATGTAAAGTCCACAAACATATTGCTTGATGAGAACCATGTTGCTAAAGTTGCTGATTTTGGTCTTTCAAGGTCAGGTCCTCTTGATACTCAACCGTATGTCAGCACTGGTGTTAAAGGCACTTTTGGGTATCTTGATCCTGAGTATTTCAGGTCGCAACAGCTGACAGAAAAATCTGATGTCTATTCATTTGGAGTAGTTCTTTTGGAAGTGTTGTGTGCAAGAGCAGTGATTGACCCATCTCTTCCAAGAGATCAGATAAACTTGGCGGAATGGGGATTGCTTTGCAAAAACAAGGGGACACTCCAAGAGATCATCGATCCTTCCATCAAGGACCAAATTGATCAAAACTCACTCAGAAAATTTAGTGAGACAATAGAAAAATGCTTGCAAGAAGATGGTTCTGATAGGCCAACCATGGGTGATGTGTTGTGGGACTTGGAGTATGCGCTGCAGCTTCAGAGAGGTGCAAATGCAATACAGAGAGAGCCGTATGATGATAGTTCTAGTAGTGTTTCTGCATCACTTCAACTGCCCAATGTTCGGCGTCTTCCTTCACTTTCCACACTGAGTGAAGCCGATGATACCATTGTGAGGCATGATGAATCCGATAGTACTGTGGATTACGTTTTCTCCCAGTTGAAGATTGATGATGCCAGATAG 2586 0.4358 MQISHPKLSPDHHLSMEIPKLHIIQHSRCIALLFLLQFSSLHFPSLGGYNVPDKYFINCGSDNSVNESGKVYVAESTLEASFSSSNTEKNQSSVSSPLYQTARIFRRESWYKFNIDLNGTYLLRLHFFPFSSPGNLSSARFNVSVPRFWLLENFDGTNDTNNNSALVKEFFMEIRTPTFKITFRPLESSFAFVNAIELFVLPLHLISDKVSFFKPIGGTSSYSGGLYSRVLETKHRLNVGGQTTKDILLRNWIPDDIYLMYKENAKNRSPYQGIEYHVDDYSDGPNATRYTAPTEVYGTAKESNLSANATNFGLFNITWALPVDNKTDHFLRLHFCDYINRYFNLTYFELSIYDALVMQVNSDENVSNVLPAPYYYDFVVNSDDSGHIKVSLTPNGTALNRSAFLNGLEIMKVIGSSDSVPRDEESDSNHLRLPVLLGSVLGGLVLAFVVVLLGFLWRFKMSKEKPVENSDWLPIPVNAGGSSHSRLTDITSHGSPLPNINLGLKIPLIDLQLATKNFHESQLIGKGGFGNVYKGVLKNGMTVAVKRSQPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERFEMILVYEYMEKGTLRDHLYNTKLPCLSWKVRLQICIDSARGLHYLHKGASGGIIHRDVKSTNILLDENHVAKVADFGLSRSGPLDTQPYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARAVIDPSLPRDQINLAEWGLLCKNKGTLQEIIDPSIKDQIDQNSLRKFSETIEKCLQEDGSDRPTMGDVLWDLEYALQLQRGANAIQREPYDDSSSSVSASLQLPNVRRLPSLSTLSEADDTIVRHDESDSTVDYVFSQLKIDDAR 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01002 861 Pfam Protein tyrosine and serine/threonine kinase 521 785 IPR001245 GO:0004672|GO:0006468
Phco8g01002 861 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Phco8g01002 861 FunFam Putative receptor-like protein kinase 229 414 - -
Phco8g01002 861 FunFam receptor-like protein kinase FERONIA 483 593 - -
Phco8g01002 861 FunFam Receptor-like protein kinase FERONIA 594 811 - -
Phco8g01002 861 Pfam Malectin-like domain 57 413 IPR024788 -
Phco8g01002 861 FunFam Putative receptor-like protein kinase 54 202 - -
Phco8g01002 861 CDD STKc_IRAK 524 789 - -
Phco8g01002 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Phco8g01002 861 Gene3D Transferase(Phosphotransferase) domain 1 594 811 - -
Phco8g01002 861 Gene3D Phosphorylase Kinase; domain 1 486 593 - -
Phco8g01002 861 SUPERFAMILY Protein kinase-like (PK-like) 495 789 IPR011009 -
Phco8g01002 861 ProSiteProfiles Protein kinase domain profile. 518 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01002 861 SMART serkin_6 518 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01002 861 Gene3D - 54 200 - -
Phco8g01002 861 Gene3D - 231 414 - -
Phco8g01002 861 PANTHER OS07G0166700 PROTEIN 505 795 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01002 Phco-Chr8 10430266 10432851 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco8g01002 Malectin_like 1.2e-24 CL0202