Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01000 ATGGTTTTGTCCAAGATTCGCCACAGGCACCTTGTTTCCTTAATTGGGTATTGTGATGAGAAGTCAGGTCCTCTTGGTACTGAATCGTATGTCACCACTGGTGTTAAAGGCACTTTTGGGTATCTTGATCCTGAGTATTTCAGGTCGCAACAGCTGACAGAAAAGTCTGATGTCTACTCATTTGGGGTAGTTCTTTTGGAAGTTTTATGTGCAAGAGCAGCGATTGACCCATCTCTTCCAAGAGATCAGATAAACTTGGCGGAATGGGGATTGCTTTGCAAAAACAAGGGGACACTCCAAGAGATCATCGATCCTTCCATCAAGGATCAAATTGATCAAAACTCACTCAGAAAATTTAGTGAGACGATAGAAAAATGCTTGCAAGAAGATGGTTCTGATAGGCCAACCATGGGTGATGTGTTGTGGGACTTGGAGTATGCGGTGCAGCTTCAGAGAGGTGCAAATGCAATACAGAGAGAGCCGTATGAGGATAGTTCTAGTAGTGTTTCTACATCACTTCAACTGCCCAATGTTCGGCGTCTTCCTTCACTCTCCACACTGAGTGAAGCCGATGATACCATTGTGAGGCATGATGAATCCGATAGTGCTGTGGATTACGTTTTCTCCTAG 630 0.4429 MVLSKIRHRHLVSLIGYCDEKSGPLGTESYVTTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARAAIDPSLPRDQINLAEWGLLCKNKGTLQEIIDPSIKDQIDQNSLRKFSETIEKCLQEDGSDRPTMGDVLWDLEYAVQLQRGANAIQREPYEDSSSSVSTSLQLPNVRRLPSLSTLSEADDTIVRHDESDSAVDYVFS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01000 209 Pfam Protein kinase domain 32 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01000 209 Gene3D Transferase(Phosphotransferase) domain 1 8 151 - -
Phco8g01000 209 SUPERFAMILY Protein kinase-like (PK-like) 2 142 IPR011009 -
Phco8g01000 209 PANTHER OS07G0166700 PROTEIN 28 151 IPR045272 GO:0004714|GO:0006468
Phco8g01000 209 ProSiteProfiles Protein kinase domain profile. 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01000 Phco-Chr8 10413017 10413888 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco8g01000 Pkinase 8.2e-10 CL0016