Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00971 ATGACCCGTGAGAGAGTGAGCCAAAAGCTTAACTGCCTCAAATCCCTCCCACAGTGCCCACCATTACATGACAAAACCCCAACTCCCATATACAAACAATTTGCTGGCCGGCTGCTTCACATGCCTCCAAAATCCAACACGAGCAGTGCTCCTACGGCTACAGGTCACTTTCCCTTTTCCCCTCTTCTCTCATTAATTCTCCTTTCACCTCTGCCCAACTTTCTTCTCATCCCTTTTAATTCATTCCAACCCCATCATCCCATCACCATAATCCCAACACCTCACACACCTGCGCTGTCCATGACGCAATTCACACCCCAACTGCCTCCCTTCCACCAAATCACACCCCTCCCCAACCCTACCATGAACAAAAACCAAATCCCTAGGACTAGGCCCTGGCCTGCAGGCTTTCCTACCTCCAAGGCCTTAACCAACTTCGGAGACGCTAACTGCATGGAACAGTTACTTGTTCACTGTGCCAACGCCATTCAAACCAACGACGTAACCCTCGCACAGCAAATCCTTTGGGTCCTCAACAACATAGCATCCCCCGACGGCGACTCCAATCAACGCCTTGCCTCCAGTTTCCTCCGCGCTCTCACCGCACGTGCGGCCCAAACCGGCACCTGCAAGATGCTCGTCGCCGTAGCCGATCATTCCCGCACCAACCTCTCCATAGACACCCACAAATTCTCCGTCATCGAGCTCGCCAACTTCGTCGACCTAACTCCCTGGCACCGCTTCGGCTTCACCGCCGCCAACGCCGCCGTCCTAGAAGCCACCGAGGGTTTCTCCGTCATCCACATCGTCGACCTCAGCCTCACGCATTGCATGCAGATTCCCACGCTCATCGACGCCATCGCCAGCCGCCACGAGGTCACTCCTCTCATTAAACTCACTGTTGCCGATGCCACCTGCAGAGACATCCCTCCTATGCTCGACCTCTCCTACGACGAACTCGGCGCCAAGTTGATCAATTTCGCAAGGTCCAGAAATGTCGTCATGGAATTCAGAGTGGTTTCTTCCACTTACCAAGATGGCTTTGCGGGTTTGATCGAACAGTTAAGAGTGCAACAACAACATTTTGTTTACGCAGCAGAACCTCGCCCCTGTGAGGCTTTGGTTATCAACTGTCACATGATGCTTCACTACATCCCCGACGAATCCCTACACGCAATTCCTGAAACTGACTTAGCCTCTTTGCTCTACGATTCTTCTTCTTCTTCTGCTGCTGCTGCTGCTTCTTCTGCTGTTAGTGTTACTTCCACTTCCTCGCTGCGATCGTTGTTCCTTAAATCCCTGCGGGGGTTGGATCCAACGGTTGTAATCTTGGTAGATGAAGATGCGGATTTGACATCCAATAACTTGGTTTGCAGGCTAAGATCTGCATTTAACTATCTATGGATACCTTACGACACTGTGGACACGTTCCTTCCACGAGGGAGCAAGCAAAGACAGTGGTACGAAGCAGACATTTGCTGGAAGATTGAGAACGTGATAGCGCACGAAGGGATTGAGAGGGTGGAGAGGGTTGAGCCTAAGAGTAGGTGGGAGCAGCGAATGAAGAACGCGAACTTTCAAGGGGTGGCTTTCAGTGAGGACTCTGTTGCGGAGGTGAAGGGCATGCTGGATGAGCATGCTGCGGGATGGGGATTGAAGAGGGAAGATGAACACATTCTCCTCACTTGGAAAGGACACAACGTCGTCTTTGCCTCTGCTTGGTTACCTGCTTGA 1734 0.5202 MTRERVSQKLNCLKSLPQCPPLHDKTPTPIYKQFAGRLLHMPPKSNTSSAPTATGHFPFSPLLSLILLSPLPNFLLIPFNSFQPHHPITIIPTPHTPALSMTQFTPQLPPFHQITPLPNPTMNKNQIPRTRPWPAGFPTSKALTNFGDANCMEQLLVHCANAIQTNDVTLAQQILWVLNNIASPDGDSNQRLASSFLRALTARAAQTGTCKMLVAVADHSRTNLSIDTHKFSVIELANFVDLTPWHRFGFTAANAAVLEATEGFSVIHIVDLSLTHCMQIPTLIDAIASRHEVTPLIKLTVADATCRDIPPMLDLSYDELGAKLINFARSRNVVMEFRVVSSTYQDGFAGLIEQLRVQQQHFVYAAEPRPCEALVINCHMMLHYIPDESLHAIPETDLASLLYDSSSSSAAAAASSAVSVTSTSSLRSLFLKSLRGLDPTVVILVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGIERVERVEPKSRWEQRMKNANFQGVAFSEDSVAEVKGMLDEHAAGWGLKREDEHILLTWKGHNVVFASAWLPA 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00971 577 ProSiteProfiles GRAS family profile. 143 575 IPR005202 -
Phco8g00971 577 Pfam GRAS domain family 153 574 IPR005202 -
Phco8g00971 577 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 140 564 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00971 Phco-Chr8 10104184 10106341 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco8g00971 GRAS 1.7e-89 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00971 8 10104184 10106341 Phco8g00971 8 10104184 10106341 ECH