Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00970 ATGAGTTGCAACGGCTGCCGAGTTCTTCGAAAGGGATGTAGCGAATCCTGTGTGTTGCGTCCTTGTTTGCAGTGGATCGAAACCGCCGAAGCTCAAGGCCATGCCACTGTCTTCGTTGCCAAATTCTTTGGCCGTGCTGACCTCATGTCCTTCGTTTCCAACGTTCCAGAAAATCAAAGACCTGCTCTGTTTCAGTCCCTGCTGTTCGAAGCTTGCGGGAGAACGGTCAACCCCGTCAACGGTGCTGTGGGCCTTCTCTGGACCGGAAACTGGCACGTCTGCCAGGCGGCCGTGGAGACCGTACTCCGCGGCGGCACGCTCAGGAGCATGCCGGAGCTCATGGGCCTGACCTCTCCCGCTGCAACCGCCGACGAGACATCGGAAGTTGCATGCTCCGACATTTGGAAAATCCGACACCCGAACCCGATTTGCGGCTTCACGAACTCCAGATCTCATAACAAAGTCTCCTCCGCTAGCAAACGCAAACGGTTGGAGGAGCCGGCGAAGCTTCAGGCGGCGCCGAATCTCGATCTCCGGCTGACGCCGATTTTTCTGCAGAAGAAGGTTGAGAATCGGCGGCCGGTGTCGCCGTCGATGACCTCCGAGGAGTCTGGTACGACGACGGCGTGCTTGGAGAGCAAATTTGGGGATCAGTGGGGTCACAGTGGAGACCGGAAAGTTCTCAACCTTTTCATTTGA 699 0.5708 MSCNGCRVLRKGCSESCVLRPCLQWIETAEAQGHATVFVAKFFGRADLMSFVSNVPENQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRSMPELMGLTSPAATADETSEVACSDIWKIRHPNPICGFTNSRSHNKVSSASKRKRLEEPAKLQAAPNLDLRLTPIFLQKKVENRRPVSPSMTSEESGTTTACLESKFGDQWGHSGDRKVLNLFI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00970 232 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Phco8g00970 232 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Phco8g00970 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00970 Phco-Chr8 10073957 10074738 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco8g00970 LOB 1.2e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01183 4 9823016 9823814 Phco8g00970 8 10073957 10074738 ECH
Phco8g00970 8 10073957 10074738 Phco8g00970 8 10073957 10074738 ECH
Phco8g00970 8 10073957 10074738 Phco4g01183 4 9823016 9823814 PCT