Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00967 ATGGCCCTAAGGCCCTTCCATTACAACTTCTCGCACGATAGATTGCTCCTTCTCCTCCGCTCTTCTCTTTCCCATTCCTTTCCCTCTCCTCCTCTCCGCTCTCCCAACTTCCCCCTAACTTTGCCACCAGCTTTCTCCCTCCGCTACTTCTCCGCCGCCCCTCTCGCAAGCTCTCCGCCGCCGCCGCCCCCAGACACCATGGCGCAGAAATTCGGAAAGTCCACGCGCCGCCCCGGTGCCTCCTCCAAGGCCAGGGTTTACGCGGACGTCAACGTTGTTCGCCCTAAGGAATATTGGGACTACGAGTCCCTCAACGTCCAGTGGGGGGAGCAAGATGATTACGAGGTGGTGAGGAAGGTTGGTAGGGGGAAATACAGTGAGGTGTTTGAAGGCGTTCACTGCACAGATGGTGAGAAATGTATCATTAAGATTCTGAAACCCGTGAAGAAGAAGAAGATCAAGAGGGAAATCAAAATATTACAGAATCTCTGTGGAGGGCCTAATATTGTAAAGTTGCTTGACATTGTTAGAGACCAGCAGTCAAAGACTCCAAGTCTTATATTTGAATATGTCAATAACACTGATTTTAAAGTGCTCTATCCAACATTGTCAGACTATGATATTCGATATTACATCTATGAACTTTTGAAGGCACTGGATTATTGCCATTCACAAGGAATCATGCATCGGGATGTGAAACCACATAATGTAATGATTGATCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGGCTTGCAGAGTTCTATCATCCTGGAAAAGAGTATAATGTTCGTGTGGCTTCAAGATATTTCAAAGGTCCTGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTGTGGAGTCTTGGTTGTATGTTTGCTGGGATGATATTTCGTAAGGAGCCATTCTTTTATGGACATGATAACTATGATCAACTGGTCAAAATAGCTAAGGTGCTTGGGACAGATGAGTTAAGTGCATATTTGGATAAGTATCGAATAGAGTTGGACCCACATCTTGCAGCACTTATTGGGAGGCATAGCCGTAAGCCTTGGGCAAAGTTTATTAATGTTGACAATCATCACTTGGCTGTTCCTGAGGCTGTTGACTTTGTTGACAAGTTATTACGTTATGATCACCAAGAACGTCCCACTGCAAAAGAAGCCATGGCCCATCCATACTTCAATCCAGTTAGAAATGCAGAAAGTAGTAGAACTCGTACGCACTGA 1242 0.4541 MALRPFHYNFSHDRLLLLLRSSLSHSFPSPPLRSPNFPLTLPPAFSLRYFSAAPLASSPPPPPPDTMAQKFGKSTRRPGASSKARVYADVNVVRPKEYWDYESLNVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDGEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELSAYLDKYRIELDPHLAALIGRHSRKPWAKFINVDNHHLAVPEAVDFVDKLLRYDHQERPTAKEAMAHPYFNPVRNAESSRTRTH 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00967 413 Gene3D Transferase(Phosphotransferase) domain 1 191 400 - -
Phco8g00967 413 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
Phco8g00967 413 CDD STKc_CK2_alpha 95 399 IPR045216 GO:0004674|GO:0006468
Phco8g00967 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Phco8g00967 413 Pfam Protein kinase domain 114 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00967 413 ProSiteProfiles Protein kinase domain profile. 114 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00967 413 Gene3D Phosphorylase Kinase; domain 1 105 163 - -
Phco8g00967 413 Gene3D Phosphorylase Kinase; domain 1 167 190 - -
Phco8g00967 413 SUPERFAMILY Protein kinase-like (PK-like) 86 403 IPR011009 -
Phco8g00967 413 FunFam Casein kinase II subunit alpha 100 190 - -
Phco8g00967 413 MobiDBLite consensus disorder prediction 393 413 - -
Phco8g00967 413 SMART serkin_6 114 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00967 413 PANTHER CASEIN KINASE II SUBUNIT ALPHA 78 409 IPR045216 GO:0004674|GO:0006468
Phco8g00967 413 MobiDBLite consensus disorder prediction 56 82 - -
Phco8g00967 413 FunFam Casein kinase II subunit alpha 191 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00967 Phco-Chr8 10041435 10049152 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Phco8g00967 Pkinase 2.7e-65 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00967 8 10041435 10049152 Phco8g00967 8 10041435 10049152 ECH