Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00946 ATGTTAGGTGAGGAAAGAAAGGAGAAGAAGAGAAGGCATAATGGCTGCGTGTGGTTTTTGGAAGCAACCCTTGTGTCTGAAAAGCAGCGGGGAAAATTGGATTTTCACGTGGCCTTAAGGCTTGGTTCCGCTTCTGGGTGGCGGTTGTTAAAGATGAGAAAAGAGAGAGAGTTAAGGTTTGTGAAGAAATGTTGGGAGTGTGAGCAAAGGTGTGTGGTGGTGGCAGGGGAATCAGATGAAGAGTTGGTGAAGGTTCTCCGGCAAGTTCAACCTTACATGTCTGCGCATACCAAGATGGTGTTTGTTGTTGTTCTGTCTGCAGAAATTGTCGGTAGTCCTTGTTTAGGTGCCACTCTCAAGAGTCTCATGGCGGCTTTGTCTTCCACCTCTCGCACATCCCTTCAAAACCTTCCCAAATTTTCATCCCACAAATTTAATTTCCACCCACAGCATTTCAATTTACGCCCTCGCTCCCCAAAATCGACGCCAAACAAACCCTTATCTTTGAACAGAGTCCCTACCTCAACATGCGAACGCTGCAACGTGTTCAGCGAGGAAGTGATCGGAAGCGTGTCGGAAGAGGAGGGTTACAGCAGCTCCATGGACGATAAGCAATTTGTGCGTTGGTTTCGTGAGACGTGGCCGTACTTGTGGGCCCACCGTGGTGCTACATTCGTTGTCATCGTTTCCGGTGAAATTGTCGCTAGTCCTTACTTGGATCCAATTCTCAAGGATATAGCCTTTCTTCATCACCTGGGAATCCGGTCTGTTCTCGTTCCGGGGACCCATGTGCAAATTGACAATCTTTTGCGTGAGAGAGGGAGAGAACCTAAATATGTTGGTCCATATAGGGTAACTGATGAAGAGTCTCTAGCAGCTGCAATGGAAGCAGCTGGGAGAATAAGATTGATGATTGAAGCAAAGCTTTCTCCTGGGCCCTCCATTTGCAATATTCGTCGACATGGTGACAATAGCCGTTTGCATGAAGTTGGTGTCAGTGTTGCAAGTGGAAACTTTCTTGCAGCCAAGAGAAGAGGGGTTGTCAAAGGAGTTGATTTTGGGTCAACTGGGGAGGTTAAAAAAGTAGACGTTTCTCGCATGCGTGAGAGGCTTGATGGCGATTGCATTGTTATTTTAAGCAACTTGGGTTACTCCAGCTCTGGACAAGTATTAAATTGCAATGCCTTTGAAGTTGCAACAGCTTGTGCGTTGGCTATAGGAGCAGACAAGCTTATATGCATTATAAATGGTCCCATACTGGATGAAAGTGGACACCTTATTCGTTTCTTAACTCTTCAAGAGGCAGACATGCTAATTCGTAATCGGGTTGAACAAAGTGAAACAGCTGCTAACTATGTGAAAGCTATTGCCGAAGGAAATTTCAACTCTCTTAAAAAATTTAATGGGGCTCCGCAGAATGGAAAACCATCTTCAGAATGTCATATTCCAACCTTTCATAATGGTGTTGGTTCTGGCAATGGGAATGGCCTTTGGTCTGGGGAGCAGGGTTTTGCTATAGGAGGTCAGGAGTCCCTAAGTGGAACTAATGGTTACCTGTCAGAGCTGGCTGCTGCAGCTTTCGTTTGCAAAGGCGGTGTTCAAAGAGTTCATTTGTTGGATGGCACTATTAGTGGAGTTCTATTGTTGGAATTGTTCAAAAGAGATGGGATGGGGACAATGGTGGCTAGTGACCTTTATGAAGGCACCCGGATGGCTCAAGTAACAGATATTTCTGGAATAAAACAACTTATCCAGCCTTTACAGGAGTCTGGCACATTAGTTATGCGGACTGATGAAGAGCTGCTTCAATCATTAGGCTCCTTCATTGTTGTGGAAAGAGAAGGTCAAATAATTGCTTGCGCTGCACTTTTTCCTTTCTTTGAAGAGAAGTGTGGAGAGGTTGCAGCAATTGCAGTATCCCCTGATTGTAGAGGCCAAGGACAGGGAGACAAATTACTTGATTATATAGAGAAGAAGGCATCATATCTTGAATTTGAAATGCTTTTCTTGCTTACAACTCGTACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATTTTATTCCTGAGAAGAAAAGGAAAAGGATTAATCTATCCCGCAAGTCCAAGTATTACATGAAGAAGCTTCTACCTAATAAGAGTGGAATTACTTTTAGTAGCAAATTTACTTCCCATTAG 2190 0.4429 MLGEERKEKKRRHNGCVWFLEATLVSEKQRGKLDFHVALRLGSASGWRLLKMRKERELRFVKKCWECEQRCVVVAGESDEELVKVLRQVQPYMSAHTKMVFVVVLSAEIVGSPCLGATLKSLMAALSSTSRTSLQNLPKFSSHKFNFHPQHFNLRPRSPKSTPNKPLSLNRVPTSTCERCNVFSEEVIGSVSEEEGYSSSMDDKQFVRWFRETWPYLWAHRGATFVVIVSGEIVASPYLDPILKDIAFLHHLGIRSVLVPGTHVQIDNLLRERGREPKYVGPYRVTDEESLAAAMEAAGRIRLMIEAKLSPGPSICNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVKGVDFGSTGEVKKVDVSRMRERLDGDCIVILSNLGYSSSGQVLNCNAFEVATACALAIGADKLICIINGPILDESGHLIRFLTLQEADMLIRNRVEQSETAANYVKAIAEGNFNSLKKFNGAPQNGKPSSECHIPTFHNGVGSGNGNGLWSGEQGFAIGGQESLSGTNGYLSELAAAAFVCKGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDISGIKQLIQPLQESGTLVMRTDEELLQSLGSFIVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKKASYLEFEMLFLLTTRTADWFVRRGFSECSIDFIPEKKRKRINLSRKSKYYMKKLLPNKSGITFSSKFTSH 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00946 729 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 570 717 IPR016181 -
Phco8g00946 729 CDD NAT_SF 608 670 - -
Phco8g00946 729 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 567 715 IPR000182 GO:0016747
Phco8g00946 729 Hamap Amino-acid acetyltransferase [argA]. 199 713 IPR010167 GO:0004042|GO:0005737|GO:0006526
Phco8g00946 729 NCBIfam amino-acid N-acetyltransferase 522 713 IPR010167 GO:0004042|GO:0005737|GO:0006526
Phco8g00946 729 SUPERFAMILY Carbamate kinase-like 201 563 IPR036393 -
Phco8g00946 729 CDD AAK_NAGS-ABP 205 561 IPR033719 -
Phco8g00946 729 PANTHER AMINO-ACID ACETYLTRANSFERASE 178 721 IPR010167 GO:0004042|GO:0005737|GO:0006526
Phco8g00946 729 Gene3D - 204 566 IPR036393 -
Phco8g00946 729 Pfam Acetyltransferase (GNAT) family 606 670 IPR000182 GO:0016747
Phco8g00946 729 Pfam Amino acid kinase family 226 432 IPR001048 -
Phco8g00946 729 Gene3D - 567 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00946 Phco-Chr8 9822289 9833632 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco8g00946 AA_kinase 3.3e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01207 4 10074737 10075159 Phco8g00946 8 9822289 9833632 PCT