Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00900 ATGTGGAATCCAAGGGACCAAGAAGATGACTCCTGGGAGGTCAGAGCGTTTGCAGAGGACACCAGCAACATCATGGGCACCACTTGGCCTCCAAGGTCCTATACCTGCACCTTCTGTAGAAGGGAGTTCCGTTCAGCACAAGCCCTCGGTGGCCACATGAACGTTCACCGCCGTGACCGAGCTCGCCTCCACCAAGCCTCACCCATCAACCACCACCATCACCACCCCATCTCCTCTCTCTCCCGCTCACACCACTCACCCTCTTTTCTCAACCTCTCTCACTCTCCGGACCCTCTTTCAAATGGTGGGGTATGCCTCTTGTACCCCTTCCCTAGCCCTAACACAGCTCCATTCTCCCCTCTTGGCCACACCACTAGTTTCAATAATGCATGTCTTGACTCTCCCTCCTCTCTTTTTTCTCCCTCCTCTTCCCTTTCACACCCTCCAATGAGGGTCCCAACTTGCTCAAATGCCTCCTTTGATTTCTCAGTGGCGCAGCCTGCCACAGGGAGGAGGAACCCTTTCTCTTCTTATTCTGGGAAAGTGGAACAAGAGCCCGCAACCTCCTCCGCTCATCATGACCAACACGAGGAGCTTGATCTAGAGCTCCGTCTGGGAAATAGATCAACATCAACATCATGA 642 0.5374 MWNPRDQEDDSWEVRAFAEDTSNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQASPINHHHHHPISSLSRSHHSPSFLNLSHSPDPLSNGGVCLLYPFPSPNTAPFSPLGHTTSFNNACLDSPSSLFSPSSSLSHPPMRVPTCSNASFDFSVAQPATGRRNPFSSYSGKVEQEPATSSAHHDQHEELDLELRLGNRSTSTS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00900 213 MobiDBLite consensus disorder prediction 187 204 - -
Phco8g00900 213 MobiDBLite consensus disorder prediction 70 93 - -
Phco8g00900 213 SUPERFAMILY beta-beta-alpha zinc fingers 31 61 IPR036236 -
Phco8g00900 213 Pfam C2H2-type zinc finger 34 58 - -
Phco8g00900 213 MobiDBLite consensus disorder prediction 170 186 - -
Phco8g00900 213 SMART c2h2final6 34 56 IPR013087 -
Phco8g00900 213 ProSiteProfiles Zinc finger C2H2 type domain profile. 34 61 IPR013087 -
Phco8g00900 213 PANTHER OS07G0101800 PROTEIN 6 208 - -
Phco8g00900 213 MobiDBLite consensus disorder prediction 170 213 - -
Phco8g00900 213 ProSitePatterns Zinc finger C2H2 type domain signature. 36 56 IPR013087 -
Phco8g00900 213 Gene3D Classic Zinc Finger 24 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00900 Phco-Chr8 9237257 9237898 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00900 8 9237257 9237898 Phco8g00900 8 9237257 9237898 ECH
Phco4g01244 4 10515285 10516043 Phco8g00900 8 9237257 9237898 PCT