Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00838 ATGAGGCGCAAAAGCAAAGTGGAAGACACGCAAAGCTACAAGAACACCGCTTTTTCTTTATATTCGCTCATGATTGATTATGTTTGTTTCTTTGAATTTTTCCTTACCTTGCCTTTTGGGAAGGTTGACATGGAGGAACGGTATGAGCCATTGAAGGAGCTTGGTTCTGGGAATTTTGGTGTGGCCAGGTTGGCCAGAGACAAGAAGACTAAAGAGCTTGTTGCGGTCAAATACATAGAGAGGGGTAAAAAGATTGATGAGAATGTTCAGAGGGAGATAATTAATCACCGATCTTTAAGGCATCCAAATATAATCAGGTTCAAAGAGGTCTTGCTGACCCCGACTCATTTAGCTATCGTCTTGGAGTATGCTTCAGGTGGTGAACTTTTTGAGAGAATATGTACTGCTGGTCGATTTAGCGAAGATGAGGCAAGATATTTCTTCCAGCAGCTAATATCCGGGGTTAGCTACTGTCATTCAATGGAAATTTGTCATAGAGATCTGAAATTGGAAAACACTCTCCTGGACGGAAAACCATCTCCTCGACTTAAAATTTGTGACTTTGGTTACTCCAAGTCTGCTCTACTACACTCTCAACCTAAATCAACTGTTGGAACTCCTGCATACATTGCTCCAGAGGTTCTGTCACGAAAGGAGTATGATGGGAAGATTTCAGATGTTTGGTCCTGTGGTGTGACTCTTTATGTCATGTTAGTTGGTGCATACCCATTTGAAGATCCAGAAGATCCTAGAAATTTCAGAAAGACTATTGGGAGAATAATTGGTGTTCAGTACTCCATACCCGACTATGTTCGTGTTTCTTCTGAGTGTAGGAATCTTCTCTCTAGCATCTTTGTTGCCGATCCTGCCAAGAGGATCACCATCCCAGAGATAAAACAGAATCCTTGGTTTCTGAAGAATTTGCCTAAAGAGATCATCGAAGCTGAAAGAAAAGGATTTGAGGAAACAAATAAAGACCATCCAAGTCAAAAGGTGGAAGAAATCATGAAGATCATACAAGAAGCAAAGGTACCAGGACCAGGATCCAAAGCTGGTGATGGTATTGGTGGGCAAGGTGGTACTGGATCATTAGATATTGAGGATGTCGAGGAAATTGATGTTAGTGGTGACTATGAACATGTGTGA 1146 0.4154 MRRKSKVEDTQSYKNTAFSLYSLMIDYVCFFEFFLTLPFGKVDMEERYEPLKELGSGNFGVARLARDKKTKELVAVKYIERGKKIDENVQREIINHRSLRHPNIIRFKEVLLTPTHLAIVLEYASGGELFERICTAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGKPSPRLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKISDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIIGVQYSIPDYVRVSSECRNLLSSIFVADPAKRITIPEIKQNPWFLKNLPKEIIEAERKGFEETNKDHPSQKVEEIMKIIQEAKVPGPGSKAGDGIGGQGGTGSLDIEDVEEIDVSGDYEHV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00838 381 ProSiteProfiles Protein kinase domain profile. 48 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00838 381 PANTHER SERINE/THREONINE KINASE 46 325 - -
Phco8g00838 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Phco8g00838 381 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
Phco8g00838 381 MobiDBLite consensus disorder prediction 345 381 - -
Phco8g00838 381 CDD STKc_SnRK2 47 303 - -
Phco8g00838 381 Pfam Protein kinase domain 48 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00838 381 FunFam Serine/threonine-protein kinase SRK2E 124 312 - -
Phco8g00838 381 Gene3D Transferase(Phosphotransferase) domain 1 124 311 - -
Phco8g00838 381 SUPERFAMILY Protein kinase-like (PK-like) 46 312 IPR011009 -
Phco8g00838 381 FunFam Serine/threonine-protein kinase SRK2E 44 123 - -
Phco8g00838 381 Gene3D Phosphorylase Kinase; domain 1 36 123 - -
Phco8g00838 381 SMART serkin_6 48 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00838 Phco-Chr8 8533223 8537304 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Phco8g00838 Pkinase 2.3e-71 CL0016