Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00771 ATGACTTCCACTATGTTCTTGTTGGTTTTGTTGATGATATTATGTATTTCACATCCCTCCTTCCAAATGCTACTCTTGCCACTTACACACACTCTTTCCCAAGCCCAATTCAACAGCACCCACCACCTCTTGAAATCCACCTCCACCCGTTCCGCCGCCCGCTTCCGCCGCCAACTCTCCCTTCCCCTCTCACCAGGCAGCGACTACACTCTCTCCTTCAACCTGGGTCCCCATGCCCAGCCCATAACCCTCTACATGGACACAGGCAGTGACTTAGTCTGGTTCCCCTGCGCCCCTTTCAAATGCATTCTCTGCGAGGGAAAGCCCAACGAGCCCAACGCCTCTCCCCCAACCAACATCACCCGAAGCGTCGCCGTTTCGTGCAAGTCTCTCGCTTGCTCCGCAGCGCACAACTTAGCCTCCTCTTCCGATCTCTGCGCAATGGCTCGTTGCCCTCTCGAATCAATCGAAACCTCTGAGTGTGCCAATTTCAAGTGTCCGCCGTTTTACTACGCCTACGGCGACGGAAGCTTAGTCGCACGTCTATATCGTGACACGCTCTCTCTCTCTTCTCTGTCTCTTAGAAACTTCACTTTCGGTTGCGCTCACACAGCCCTCGCCGAACCTACCGGAGTCGCCGGATTCGGCCGCGGTTTGCTCTCTCTCCCGGCGCAGCTAGCTACTCTCTCTCCTCAGCTTGGAAACCGCTTTTCGTATTGCCTTGTTTCTCACTCGTTTGACTCTGACCGAGTTCGAAAGCCAAGTCCACTCATTCTCGGCCGTTACGAGGAGAAGGAAAAGGAGAAGATCAGTGGAGGTGGAATGGTTGAGTTCGTGTACACGTCTATGCTTGAAAACCCTAAGCATCCTTATTTTTATACCGTTGGCTTAATCGGAATCTCCGTTGGGAAAAGGACTATTCCGGCGCCGGAGATGCTGCGGCGGGTGAACAATCGAGGAGACGGTGGAGTTGTTGTGGATTCCGGCACGACGTTCACGATGTTGCCGGAGGGATTTTATAACTCGGTGGTTGACGAGTTTGACCGCCGAGTCGGGCGAGTCAACAAGCGCGCGCGTAAGGTTGAGGAAAAAACTGGACTCGCGCCGTGCTATTATTTGAATGCGGTGGCGGAAGTGCCGGTTGTGACGCTGCGTTTTGCTGGAGGGAATTCCAGTGTGGTGCTGCCTAGGAAGAACTATTTCTACGAGTTTTTGGACGGTAGCGATGAGAGGAAGGGGAAGAGGAGGGTGGGATGTTTGATGGTGATGAACGGTGGAGATGAAGGTGAGTTGAGTGGGCCCGGGGCCACACTCGGGAATTACCAGCAGCAAGGATTTGAGGTTGTGTATGAGCTGGAAGAGAAGCGCGTGGGTTTCGCCAAGAGGCATTGCGCGTCGCTTTGGGAGAGACTGAATCGTGACAAGAACTAG 1431 0.5381 MTSTMFLLVLLMILCISHPSFQMLLLPLTHTLSQAQFNSTHHLLKSTSTRSAARFRRQLSLPLSPGSDYTLSFNLGPHAQPITLYMDTGSDLVWFPCAPFKCILCEGKPNEPNASPPTNITRSVAVSCKSLACSAAHNLASSSDLCAMARCPLESIETSECANFKCPPFYYAYGDGSLVARLYRDTLSLSSLSLRNFTFGCAHTALAEPTGVAGFGRGLLSLPAQLATLSPQLGNRFSYCLVSHSFDSDRVRKPSPLILGRYEEKEKEKISGGGMVEFVYTSMLENPKHPYFYTVGLIGISVGKRTIPAPEMLRRVNNRGDGGVVVDSGTTFTMLPEGFYNSVVDEFDRRVGRVNKRARKVEEKTGLAPCYYLNAVAEVPVVTLRFAGGNSSVVLPRKNYFYEFLDGSDERKGKRRVGCLMVMNGGDEGELSGPGATLGNYQQQGFEVVYELEEKRVGFAKRHCASLWERLNRDKN 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00771 476 SUPERFAMILY Acid proteases 64 469 IPR021109 -
Phco8g00771 476 CDD pepsin_A_like_plant 69 464 IPR034161 -
Phco8g00771 476 FunFam Probable aspartyl protease At4g16563 59 259 - -
Phco8g00771 476 Gene3D Acid Proteases 59 260 IPR021109 -
Phco8g00771 476 FunFam aspartic proteinase nepenthesin-1 267 469 - -
Phco8g00771 476 Pfam Xylanase inhibitor C-terminal 293 460 IPR032799 -
Phco8g00771 476 Gene3D Acid Proteases 272 469 IPR021109 -
Phco8g00771 476 Pfam Xylanase inhibitor N-terminal 69 260 IPR032861 -
Phco8g00771 476 Coils Coil 344 364 - -
Phco8g00771 476 ProSiteProfiles Peptidase family A1 domain profile. 69 460 IPR033121 -
Phco8g00771 476 PANTHER ASPARTYL PROTEASES 6 458 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00771 Phco-Chr8 7711539 7712969 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00771 8 7711539 7712969 Phco8g00771 8 7711539 7712969 ECH
Phco8g00771 8 7711539 7712969 Phco7g01884 7 22049943 22051978 ECH