Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00740 ATGAACACATTTTCGCATGTACCTCCAGGCTTTCGGTTTCATCCGACAGATGAAGAGCTCGTAGGTTACTACCTTAGGAAGAAGGTAGCGTCTAAAAGGATTGATCTAGATGTCATAAAAGATGTAGATCTCTATAAAATTGAACCATGGGATCTCCAAGAGTTATGCAAAATAGGAACAGATGAACAAAGTGACTGGTATTTCTTCAGTCATAAAGATAAGAAATACCCAACTGGAACTCGAACAAATAGAGCTACAAAAGCAGGATTCTGGAAAGCGACGGGAAGAGACAAGGCAATATACTCTAAGCATTGCCTGATTGGCATGAGAAAGACTCTTGTGTTTTACAAAGGAAGAGCCCCAAATGGACAGAAGTCTGATTGGATCATGCATGAGTACAGGCTAGAAACTAATGAAAATGGAACTCCTCCGGAAGAAGGCTGGGTTGTGTGTAGAGTGTTCAAGAAGCGAATGACTACAATGCAGAAAGTGGGAGAGTATGATCAGTCACCCTGTTGGTACGATGAGCAAGTTTCCTTCATGCAAGATTTTGAATCCCCCAGGCGCATTTCTCAGCCTTATGCATCGTACCATCAGCACCATCCCTGCAAACCCGAGCTCATGGAATTGCAATACAACAACATACCCCACGATGCATTCCTCCAACTTCCACAGCTTGAAAGCCCCAAAGTTACTCACTCAGCAGCCAGTTTGAGTTGCAGCTCAGTTGTCCCTTTTGGTTATGAAAGCAGCAACAACAAAAACAATGGAAGCACAATGCAGTTCTCATCACTCACTCAGGAAGAACAGATACAATACTGCCACCAACAAAGTCAAAATTCCCTCTATTGTACCAATGATAATGCGGTTGACCAAGTCACAGATTGGCGAGTACTTGACAAATTTGTTGCTTCTCAGCTCAGTCACAACCAAGATGTTTCCAAGGAGACCAGTTATTCCAATGCACATATTTTCCATGTGGCTGAACAAATTTCTGTGGTAGCCAATGGATCCAAAAAGGAGCAAATTTCCCAGGAATATGCTTTAACATCTACCTCCAGTTGCCAGATTGACCTGTGGAAGTGA 1086 0.4282 MNTFSHVPPGFRFHPTDEELVGYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGTDEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKHCLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTPPEEGWVVCRVFKKRMTTMQKVGEYDQSPCWYDEQVSFMQDFESPRRISQPYASYHQHHPCKPELMELQYNNIPHDAFLQLPQLESPKVTHSAASLSCSSVVPFGYESSNNKNNGSTMQFSSLTQEEQIQYCHQQSQNSLYCTNDNAVDQVTDWRVLDKFVASQLSHNQDVSKETSYSNAHIFHVAEQISVVANGSKKEQISQEYALTSTSSCQIDLWK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00740 361 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Phco8g00740 361 FunFam NAC domain-containing protein 16 160 - -
Phco8g00740 361 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Phco8g00740 361 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Phco8g00740 361 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 300 - -
Phco8g00740 361 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00740 Phco-Chr8 7387119 7390289 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco8g00740 NAM 1.8e-37 No_clan