Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00691 ATGACGAAATGGTGGAGTAAGAGTGAAATCAGGGCAGTGGATTTGCATATCGTAATAGAAAATTTTAAAAGTGCTGTTGTTTGTGTTAGTGGTATGGGTAGGCAACCCTGCTGTGATAAACTTGGGGTGAAGAAAGGTCCATGGACTGCAGAGGAAGACAAGAAGCTCATCAACTTCATTCTCACCAATGGTCAGTGTTGTTGGCGTGCTGTGCCAAAGCTTGCTGGCCTTAGGCGTTGTGGCAAGAGTTGTCGCCTTCGTTGGACTAATTATCTTCGCCCAGACTTGAAGAGAGGACTCCTAACAGAAGCAGAGGAGCAACTTGTTATTGATCTCCATGCCCGTCTTGGCAACAGGTGGTCCAAAATTGCTGCCAGGTTACCCGGAAGAACAGACAACGAGATTAAAAATCATTGGAACACACATATCAAGAAAAAACTCCTTAAGATGGGTATTGATCCCGTTACTCATGAACCTCTCAATAAACAAGCAGCATCTCAGGATAGTTCAACCTCCCCTTCCGAGCATTTGCCACAACCTGGAAATAACCTTGATCAGGTGAAGGAAACTGATGGGGTTCTCAACTCAGAGGAGAATTCAAGTTCATCCCAAGCTGAAAATTCTTCTGGGGATGATTCACTTTTGCTAGAGAGCATTTGCAGTGACGATTCTCTATTAAACACCCTGTGGCTGGATGAAACTCCTCTGATGGAAGCACTATGGGACACAACACCCAAACTAGAGAATACTAGTACTAACATGGGTTCGGTACCATCTTGGGAGGACAATTGTGGTTGGTTATTGGACTGTCAGGACTTCGGTATTCATGATTTTGGGTTTAACTGTTTCAACGAGATAGAGTCAAAGGCACTGCAAGCTCTAGAAATGAAGGACGACGGGCATTAA 906 0.4448 MTKWWSKSEIRAVDLHIVIENFKSAVVCVSGMGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHEPLNKQAASQDSSTSPSEHLPQPGNNLDQVKETDGVLNSEENSSSSQAENSSGDDSLLLESICSDDSLLNTLWLDETPLMEALWDTTPKLENTSTNMGSVPSWEDNCGWLLDCQDFGIHDFGFNCFNEIESKALQALEMKDDGH 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00691 301 Pfam Myb-like DNA-binding domain 102 142 IPR001005 -
Phco8g00691 301 Pfam Myb-like DNA-binding domain 45 92 IPR001005 -
Phco8g00691 301 FunFam MYB transcription factor 42 98 - -
Phco8g00691 301 SUPERFAMILY Homeodomain-like 42 139 IPR009057 -
Phco8g00691 301 MobiDBLite consensus disorder prediction 161 211 - -
Phco8g00691 301 ProSiteProfiles Myb-like domain profile. 40 92 IPR001005 -
Phco8g00691 301 CDD SANT 47 92 IPR001005 -
Phco8g00691 301 Gene3D - 43 98 - -
Phco8g00691 301 FunFam MYB transcription factor 101 177 - -
Phco8g00691 301 PANTHER F14D16.11-RELATED 32 202 - -
Phco8g00691 301 Gene3D - 102 175 - -
Phco8g00691 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 147 IPR017930 -
Phco8g00691 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 92 IPR017930 -
Phco8g00691 301 ProSiteProfiles Myb-like domain profile. 93 143 IPR001005 -
Phco8g00691 301 CDD SANT 102 143 IPR001005 -
Phco8g00691 301 SMART sant 44 94 IPR001005 -
Phco8g00691 301 SMART sant 97 145 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00691 Phco-Chr8 6953978 6956043 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco8g00691 Myb_DNA-binding 3.3e-13 CL0123