Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00680 ATGGCGTCCAATCAGGAGGAACAGGACATGGATCAAGATCAAGACGGAGGAAAAACGGACCTCAGCACCAGCCACGCCGACGCAGACAAACCCTCATCCCAACGCACTAACCTCAATGGACTTCCCCAACACTTCCAAGTCCTGCCGCTCAAAAACGAGCCAACGGATTCCGACCCTGACCCGGACCCAAACGCACCGATTCCTCCGTCGCCGCCGATGCACCTTTCGCTCAAATCGCCCAGGCGCTCCTCCACCAAGGACCGCCACACCAAAGTCGAAGGCCGTGGCCGTAGGATCCGAATACCCGCCACCTGCGCCGCCCGGATCTTCCAACTCACCCGAGAGCTGGGCCACAAATCCGACGGTGAAACTGTCCGGTGGCTCCTCGAGCACTCCGAGCAGGCCATCATAGAAGCCACCGGCACAGGTACGGTGCCGGCCATCGCGGTCTCCGTCGGTGGCGCGCTCAAAATCCCAACGACCTCGAGCGCCAACCAAAACAACACGGGCGAGGAAGGCGAGTCTAACAAGAAACGGAAACGCCCTTCCAACAGCGAGTTCGTGGACGTAAACGATGCCGTTTCGCAGACGTCCGGTCTGGCCCCGATTCAAGTACCCCAAGGACTGGTCCCGGTCTGGGCCGTAAGTAACCCCAGCATGGTGGTCCCCGCTAACACCTTCTGGATGATCCCGCAGGCCGCGACCACCAGCAACCCCTTGGGCAGAGTTACGGGCCCCGCCAGCCAACGGCCTCAGATATGGGCCTTATCTCCCTCCGTATTCAACGTGGCGGCTAGGCCCATGTCCAGTCTCGTGACGACAAGGAATATTCCAGAAGCTTGGCCCGTTATGACGGCCTGCAGTAACGGTTCTAACTCAGCAGCGGTGAGTACGAGCACGGTGGGGGCTAAAGTGGCTACTAATTCTAGCATGGCCCCTAGTGTTAGTTCCAGCGCCACCAAGACTCAGACGTTGCGGGATTTTTCCCTCCAAATTTACGATAAGCAAGAGTTGCAGTTCTTGGGCCGCTCTGGCACTCACGCCAATCCATGA 1053 0.5907 MASNQEEQDMDQDQDGGKTDLSTSHADADKPSSQRTNLNGLPQHFQVLPLKNEPTDSDPDPDPNAPIPPSPPMHLSLKSPRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHSEQAIIEATGTGTVPAIAVSVGGALKIPTTSSANQNNTGEEGESNKKRKRPSNSEFVDVNDAVSQTSGLAPIQVPQGLVPVWAVSNPSMVVPANTFWMIPQAATTSNPLGRVTGPASQRPQIWALSPSVFNVAARPMSSLVTTRNIPEAWPVMTACSNGSNSAAVSTSTVGAKVATNSSMAPSVSSSATKTQTLRDFSLQIYDKQELQFLGRSGTHANP 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00680 350 MobiDBLite consensus disorder prediction 59 75 - -
Phco8g00680 350 MobiDBLite consensus disorder prediction 11 25 - -
Phco8g00680 350 Pfam TCP family transcription factor 84 180 IPR017887 -
Phco8g00680 350 MobiDBLite consensus disorder prediction 172 186 - -
Phco8g00680 350 MobiDBLite consensus disorder prediction 80 98 - -
Phco8g00680 350 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 336 IPR005333 GO:0003700
Phco8g00680 350 ProSiteProfiles TCP domain profile. 85 139 IPR017887 -
Phco8g00680 350 MobiDBLite consensus disorder prediction 26 43 - -
Phco8g00680 350 MobiDBLite consensus disorder prediction 1 98 - -
Phco8g00680 350 MobiDBLite consensus disorder prediction 158 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00680 Phco-Chr8 6819862 6820914 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phco8g00680 TCP 7e-29 No_clan