Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00582 ATGGGTCTCTGCGGTTCAAAGCCTCGTGCGAATCCCACACTCTCTTCATCTCCCAATTCCAACACCCACTTCACAGACACCAATGCCAATGAACAATTACCGAAAAATCCTATTCCTACTCCAAAAAAATCTCCCCTTTTCCCGTTCTACACTCCGAGCCCGGCCCACCACTTTTTCTCCGCCAAGTCTCCGGCGCCAGCAACTCCCCGGCGGTTCTTCAAGCCTCCGTCGCCAGCGAAGCACATTCGGGCCGTGCTGGCCCGTCGTCATGGGTCTGTTAAGCCCAACGAAGCTACCATCCCAGAAGATGAAGTGGTTGCTCTTGACAAGAACTTCGGATTCTCGAAACAGTTTGAGCAAAAGTTTGAGGTTGGGGGCGAGGTTGGACGAGGACACTTTGGTTACACTTGTTCTGCGAAGTTCCTTAAGGGCCAACTCAAAGGCCAACACGTCGCCGTCAAGGTCATCCCTAAAGCCAAGATGACAACTGCAATTGCAATTGAGGATGTGAGGAGGGAGGTGAAGATATTGAGGGCCTTGACTGGACATAAAAATCTGATTCAGTTCCACGATGCGTATGAGGATAATGACAATGTCTACATAGTAATGGAGTTGTGCGAAGGAGGAGAGCTTTTGGACAGAATATTGTCGAGAGGAGGGAAATACACGGAGGAAGATGCAAAAGCTGTCATCATACAAATACTAAATGTTGTTGCGTTTTGCCATCTACAGGGTGTTGTGCATCGCGATCTCAAACCAGAGAATTTCTTATTCACATCAAAAGAAGAAAACTCTGAGCTGAAGGCCATTGACTTTGGATTGTCGGATTTTGTCAAACCAGATGAAAGGCTTAATGATATTGTTGGGAGTGCATACTATGTGGCTCCTGAAGTTTTGCATAGAGCTTATAGTACAGAGGCTGATGTCTGGAGTGTTGGTGTGATTGCATATATTTTACTATGTGGCAGTCGTCCATTTTGGGCACGGACTGAATCTGGGATCTTCCGTGCCGTATTGAGGGCTACTCCAAGTTTTGATGAACCTCCATGGCCATCTCTATCAGATGAGGCAAAGGATTTTGTTAAGAGACTTCTAAATAAAGATCCAAGGAAAAGAATGACTGCAGCGCAGGCATTGAGTCATCCGTGGATTAAAAATTATAAGGACGTAAAAGTACCTTTGGATATTCTAGTGTTCAAGCTCATGAAGACATACATGCGTTCCTCCTCTCTACGAAAAGCAGCTTTAAGGCAATTTTCCAGCCACTGCCTCACCGCCTTGCCAGAACTGCCACCGCTGCCGTCTCACTGGAGCCGCTGCCGGACCCTCGCCGGAGCCGGAATCTCACCGGAGCCGCCGCCGGAAGCTCGCCGGAGCCGCTGCCGGAAGCTCGCCGGAAACTTCGCCGGAATCTTGCCGGAACTGTCGCCGGAATCTTGCCAGAACCACCGCTGGAATCTTGCCGGAACTGCCGTCGAAATAGCTACTGCCGCCAATTGA 1500 0.492 MGLCGSKPRANPTLSSSPNSNTHFTDTNANEQLPKNPIPTPKKSPLFPFYTPSPAHHFFSAKSPAPATPRRFFKPPSPAKHIRAVLARRHGSVKPNEATIPEDEVVALDKNFGFSKQFEQKFEVGGEVGRGHFGYTCSAKFLKGQLKGQHVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLIQFHDAYEDNDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVIIQILNVVAFCHLQGVVHRDLKPENFLFTSKEENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSVGVIAYILLCGSRPFWARTESGIFRAVLRATPSFDEPPWPSLSDEAKDFVKRLLNKDPRKRMTAAQALSHPWIKNYKDVKVPLDILVFKLMKTYMRSSSLRKAALRQFSSHCLTALPELPPLPSHWSRCRTLAGAGISPEPPPEARRSRCRKLAGNFAGILPELSPESCQNHRWNLAGTAVEIATAAN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00582 499 MobiDBLite consensus disorder prediction 9 37 - -
Phco8g00582 499 Pfam Protein kinase domain 123 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00582 499 PANTHER SERINE/THREONINE-PROTEIN KINASE 108 412 - -
Phco8g00582 499 FunFam CDPK-related kinase 3 114 286 - -
Phco8g00582 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Phco8g00582 499 ProSitePatterns Protein kinases ATP-binding region signature. 128 154 IPR017441 GO:0005524
Phco8g00582 499 MobiDBLite consensus disorder prediction 1 46 - -
Phco8g00582 499 ProSiteProfiles Protein kinase domain profile. 122 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00582 499 SMART serkin_6 122 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00582 499 SUPERFAMILY Protein kinase-like (PK-like) 120 439 IPR011009 -
Phco8g00582 499 CDD STKc_CAMK 121 383 - -
Phco8g00582 499 FunFam Calcium-dependent protein kinase SK5 294 389 - -
Phco8g00582 499 Gene3D Transferase(Phosphotransferase) domain 1 212 414 - -
Phco8g00582 499 Gene3D Phosphorylase Kinase; domain 1 115 211 - -
Phco8g00582 499 FunFam CDPK-related kinase 1 115 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00582 Phco-Chr8 5817411 5820831 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco8g00582 Pkinase 2.1e-71 CL0016