Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00577 ATGCGCTGGTTACCCACGCTTTCCTTCGCGCCTTCCAGTTCCTCCTCGTCTTCCTCCACAGCTTCCGCCGACCACCGCCGGAAGGCCAAGCTATTCGGTAATTCGTCCAAGAAGCGCGCCTGCCACGTCGTCAGCGAGAACGATGTCAGGTCGCTTGATGAAGATTCTCCCTTCCCTTCCCCCGGCACGCCTCAGCCCTTGCCCCTGCCGGAGCTCGCCGCCTCCCCGGCCCTAGTCCGTAACAGAGACGGCGAGCGCCGTCTCCCCTCGCCCAAGGATGCTGCTACAGCCACCGCCACCACCGGCTTTCAGATGCGGAGTGTTTTTGCTAGCCAAGACACGAGAAGGAATATGGAACAGGCTGAAACTAGGTCATCGAGAATGGTGCATCAAGATGCGAGTGGTTGTTGTGAGAGTGCTCGAGATAACAGTAATACTAATAATAGTAACTTGGTGAGCGTCCCTCAAAGAAGCACTATTTCAGGTAGTCCCTTTGCAAGTCCTTTAATGAGTCCACAGAAAACAAAAAATGGTGATTTTGTGCCATATTATTATGCGAGTCCCAAAGGAAATCAGTTCTGGTCTGCACCAGAAATGTCTATCTGTGAAACAGGGTTGCTACCTCCTGCCTTCTTTGATCTATCCGTGTCAGGCACAGAAACTTCTCCCCCTCCCACCTCCCATCAAAGCCCACAGAGGAAAAGTCCCCAGCAACACGCCAGAACCACGAGTGGACCTCCATCCCCTATACATTCCAAGTTATCACTTGAACCCTCAATGGTGCGCCGTGAAAGTAGTGTTCCTCCCGTCAGTGTTCACCCCTTGCCCCTGCCTCCCGGGGCTGCCCTGCCCTCTCCACCAGCGGCTAGTACATTTTCCCATGTTAGGTCAGAATCATTGCCAATGAAAAACCAATGGAAGAAAGGGAAACTTATTGGGCGTGGGACATTTGGAAGTGTTTATGTTGCAACCAATAGGGAAACCGGGGCATTATGTGCGATGAAGGAAGTAGAAATATTTCCTGATGATCCAAAATCTGCTGAGTGTATAAAACAGTTAGAGCAGGAAATTAAAGTTCTTAGCCAGCTGAAGCATTCAAACATCGTGCAGTATTATGGCAGTGAAATAGTTAATGACCGATTTTATATTTATCTGGAATATATTCATCCTGGTTCAATTAATAAATACGTCCGTGAGCATTGTGGTGCCATAACAGAATCTGTCATTCGAAATTTCACTCGACATATTCTATCAGGGTTGGCTTATTTACATAACAAAAAAACAATTCATAGGGACATCAAAGGGGCTAACTTGCTTGTTGACTCTGCTGGAGTTGTTAAGCTTGCTGATTTTGGGATGGCTAAGCATCTAACTGGGTTCGAAGCTAATCTTTCTTTGAGGGGAAGTCCGTACTGGATGGCTCCAGAGCTTTTGCAGGCTGTGATGCAAAAGGATAACAGTCCTGATCTTGCTTTTGCTAGTGATATTTGGAGTCTGGGTTGTACCATCATTGAAATGTTCACAGGGAAGCCTCCTTGGAGTGAATACGAAGGAGCCGCAGCTCTGTTTAAGGTTATGAAGGAAACCCCTCCTATTCCTGAAACATTGTCACCGGAGGGTAAAGATTTCTTGAGGTGCTGCTTTAAAAGAAATCCAGCAGAGCGGCCAGCAGCTGCAGTTTTACTAGAACATCGATTTTTGAAAAACTCTCAACCGCCTGATGTTTTATCTCCCACTCAGCTCTATAATGGAACAGGCCTCATGGACAAACCACACAGTCCTATTCAACAATCTGAATATAAACTTGATCAGTCGTCAATTTCCTGTGGAAACATTGCCAAGGGTAAAGCTGACAGGCGTGGATTTCCCATTCCTTCCCCGGATATTCTTCCTGCATCCTTGGACCAATAA 1911 0.4751 MRWLPTLSFAPSSSSSSSSTASADHRRKAKLFGNSSKKRACHVVSENDVRSLDEDSPFPSPGTPQPLPLPELAASPALVRNRDGERRLPSPKDAATATATTGFQMRSVFASQDTRRNMEQAETRSSRMVHQDASGCCESARDNSNTNNSNLVSVPQRSTISGSPFASPLMSPQKTKNGDFVPYYYASPKGNQFWSAPEMSICETGLLPPAFFDLSVSGTETSPPPTSHQSPQRKSPQQHARTTSGPPSPIHSKLSLEPSMVRRESSVPPVSVHPLPLPPGAALPSPPAASTFSHVRSESLPMKNQWKKGKLIGRGTFGSVYVATNRETGALCAMKEVEIFPDDPKSAECIKQLEQEIKVLSQLKHSNIVQYYGSEIVNDRFYIYLEYIHPGSINKYVREHCGAITESVIRNFTRHILSGLAYLHNKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGFEANLSLRGSPYWMAPELLQAVMQKDNSPDLAFASDIWSLGCTIIEMFTGKPPWSEYEGAAALFKVMKETPPIPETLSPEGKDFLRCCFKRNPAERPAAAVLLEHRFLKNSQPPDVLSPTQLYNGTGLMDKPHSPIQQSEYKLDQSSISCGNIAKGKADRRGFPIPSPDILPASLDQ 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00577 636 MobiDBLite consensus disorder prediction 81 100 - -
Phco8g00577 636 SUPERFAMILY Protein kinase-like (PK-like) 296 598 IPR011009 -
Phco8g00577 636 FunFam Mitogen-activated protein kinase kinase kinase 5 303 604 - -
Phco8g00577 636 MobiDBLite consensus disorder prediction 213 254 - -
Phco8g00577 636 ProSiteProfiles Protein kinase domain profile. 306 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00577 636 MobiDBLite consensus disorder prediction 136 173 - -
Phco8g00577 636 MobiDBLite consensus disorder prediction 7 22 - -
Phco8g00577 636 ProSitePatterns Protein kinases ATP-binding region signature. 312 335 IPR017441 GO:0005524
Phco8g00577 636 MobiDBLite consensus disorder prediction 215 250 - -
Phco8g00577 636 MobiDBLite consensus disorder prediction 1 74 - -
Phco8g00577 636 PRINTS Tyrosine kinase catalytic domain signature 494 516 IPR001245 GO:0004672|GO:0006468
Phco8g00577 636 PRINTS Tyrosine kinase catalytic domain signature 422 440 IPR001245 GO:0004672|GO:0006468
Phco8g00577 636 PRINTS Tyrosine kinase catalytic domain signature 385 398 IPR001245 GO:0004672|GO:0006468
Phco8g00577 636 PRINTS Tyrosine kinase catalytic domain signature 536 558 IPR001245 GO:0004672|GO:0006468
Phco8g00577 636 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 12 580 - -
Phco8g00577 636 Gene3D Transferase(Phosphotransferase) domain 1 302 593 - -
Phco8g00577 636 SMART serkin_6 306 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00577 636 MobiDBLite consensus disorder prediction 613 636 - -
Phco8g00577 636 Pfam Protein kinase domain 307 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00577 Phco-Chr8 5745292 5749654 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco8g00577 Pkinase 3.8e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01081 4 8709033 8712562 Phco8g00577 8 5745292 5749654 PCT