Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00550 ATGCCATCGTCCAACTCCGGCGAGAGCCGCCGAGCTGCCAAGCCCCAGAGCTCCGCCGGAGCGCCGCCACCGCCGGAGCAAGAGAACCTTCCCTGCCCCCGTTGCGAGTCCACCAACACCAAGTTCTGCTACTACAACAACTACAACTACTCCCAGCCGCGCCACTTCTGCAAGTCCTGTCGCCGGTACTGGACCCATGGCGGCACACTCCGCGACATCCCCGTCGGCGGTGGCAGCCGCAAGAACGCCAAGCGCTCCCGCACCCACCACACTGCCACTTCCTCCTCCTCCTCCACCATGACGTCACCTCAGGAGCACGCTTTACCCGCATTGGCCCCTGTCCCAACGACCCAAGGAGGGTCCATGCACTTCATGGACGGTGACGTTAATAAACAGAATAACGTTAATGTTTGCGGGAGCTTCACTTCGTTGCTGAACAACACCCAGGGCAATGGGTTTCTCGCCCTCGGCGGGTTTGGGCTTGGGCTTGGACACGGGTTCGAGGACATGGGCTTTGGGATTGGCAGGTCAGGCTGGGGCTTCCCCGGAATGGTGGATAGTGCCAACATTGGCGGCGCCGTTCCGTCTTCTGGATTGAGCACGTGGCAGTTAGAGAGTGGCGAAGGTGGGTTTGTTAGTGGAGACTGTTTCTCGTGCCCTGGGCTTGCGATTTCCACACCGGGGAATGGTCTCAAATGA 699 0.6037 MPSSNSGESRRAAKPQSSAGAPPPPEQENLPCPRCESTNTKFCYYNNYNYSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTHHTATSSSSSTMTSPQEHALPALAPVPTTQGGSMHFMDGDVNKQNNVNVCGSFTSLLNNTQGNGFLALGGFGLGLGHGFEDMGFGIGRSGWGFPGMVDSANIGGAVPSSGLSTWQLESGEGGFVSGDCFSCPGLAISTPGNGLK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00550 232 MobiDBLite consensus disorder prediction 89 105 - -
Phco8g00550 232 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 152 IPR045174 GO:0003700|GO:0006355
Phco8g00550 232 MobiDBLite consensus disorder prediction 71 123 - -
Phco8g00550 232 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Phco8g00550 232 MobiDBLite consensus disorder prediction 1 32 - -
Phco8g00550 232 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Phco8g00550 232 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00550 Phco-Chr8 5454027 5454725 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco8g00550 zf-Dof 9.5e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00550 8 5454027 5454725 Phco8g00550 8 5454027 5454725 ECH
Phco8g00550 8 5454027 5454725 Phco7g02131 7 37659562 37661032 PCT