Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00501 ATGAGAGTTCCCTCATCCCCACAGCCCAACACCCATTCTCCCAACCCAAACCTCCTCCTCCACACCCTCCCAAACACCACCAATCCCACCTTCACCTACGAACCCACCTCCGTCCTCGACCTCTGCCGCAGCCCCAGCCCTGAAAAGAAACCAACTGTCCCCAAGCCAGAACCACAACACAACACCAACAACATCACCACCATCACAGCCACCACCAATACCACCACCACCAACAACAACAACCTAGACCTGGACGATCATGTCTTACCAAATTCAGATTGGTGGGAGTCCATCATGAAGGACCTAGCCTTACCCGAAGATTCTCCCACACCCCTCTCCAAGCCTAACAACATCAACCCATGCATCCCTGATTTTCCACCTTCTCATGACCCACCCTTTGATCACCCTCCAGACTTCACCTCGCTGTCAGAAATTTACAACCAAAACCTCCCCTACAACTACACCACCACCAATGCTTTGGACCATTCCTTTCAAGACCTCAACCACCACCACCACAACCCCACCAACAACATTAACAACAACTGGGACTTCATCGAGGAGCTTATCCGCGCCGCCGATTGCTTCGACAGCAGCCACTTCCAACTGGCTCAAGCCATACTCGAACGCCTCAACAACCGCCTCATTCGCTCACCCATGGCCAAGCCGCTCCACCGAGCTGCGTTTCACTTCAAAGATGCTCTCCATTCCATTCTCTCCGGTTCCAACCGTGCCGGTTCCAATCGCCTCTCCTCCATGGCCGAGATTGTTCAGACCATCAAAACGTTCAAGGCCTTTTCAGGAATCTCTCCCATCCCAATGTTCTCTATCTTCACCACCAACCAGGCCTTGCTCGAAACCCTAAATGGATCCCCCTTCGTCCACGTCATCGATTTCGAAATCGGGCTCGGAATCCAATACGCCTCTCTCATGAAAGAAATCGCAGAGAAGGCCGCCGGCGCTTCGCCACTCCTCCGCATCACCGCAGTCGTGCCAGAGGAGTACGCCGTCGAGAGCCGCCTCGTCCGCGAGAATCTGAACCAGTTTGCGCATGACCTCGGGATCCGCACACAGGTGGACTTCGTCCCGCTTCGCACCTTCGAGACGGTGTCGTTCAAGGCAGTTAGGTTCGTCGACGGCGAGAAGATTGCGGTGCTGCTGTCACCGGCGATCTTCTGCCGCCTCGGATCCGGCGGCGCAAGCGTCGGTGCGTTCCTCGCCGACGTGAGGAGGATGGCGCCCGGAGTGGTGGTTTTTGTAGACGGGGAGGGGTGGACGGAGGCCACCGCTGCCGCGTCTTTCCGGCGCGGCGTGGTGAACAGCTTGGAGTTTTACTCGATGATGCTCGACTCTCTGGATGCGTCGGTGGCGGCGGGAGGAGGCGGCGAGTGGGTGAGGAGAATCGAGATGCTTCTACTGCGGCCGAAGATCTTCGCAGCGGTGGAAAGCGCAAGGAGGAGGGCGCCACCATGGAGGGAGGCATTTTACGGCGCCGGAATGAGGCCGGTGCAACTGAGCCAGTTCGCTGATTATCAAGCGGAGTGTTTGCTGGCGAAGGTGCAAATCAGAGGGTTCCACGTGGACAAACGGCATGCTGAGTTGGTGCTGTGCTGGCACGAACGAGCCATGGTTGCGACGTCAGCTTGGCGGTGCTAG 1653 0.5711 MRVPSSPQPNTHSPNPNLLLHTLPNTTNPTFTYEPTSVLDLCRSPSPEKKPTVPKPEPQHNTNNITTITATTNTTTTNNNNLDLDDHVLPNSDWWESIMKDLALPEDSPTPLSKPNNINPCIPDFPPSHDPPFDHPPDFTSLSEIYNQNLPYNYTTTNALDHSFQDLNHHHHNPTNNINNNWDFIEELIRAADCFDSSHFQLAQAILERLNNRLIRSPMAKPLHRAAFHFKDALHSILSGSNRAGSNRLSSMAEIVQTIKTFKAFSGISPIPMFSIFTTNQALLETLNGSPFVHVIDFEIGLGIQYASLMKEIAEKAAGASPLLRITAVVPEEYAVESRLVRENLNQFAHDLGIRTQVDFVPLRTFETVSFKAVRFVDGEKIAVLLSPAIFCRLGSGGASVGAFLADVRRMAPGVVVFVDGEGWTEATAAASFRRGVVNSLEFYSMMLDSLDASVAAGGGGEWVRRIEMLLLRPKIFAAVESARRRAPPWREAFYGAGMRPVQLSQFADYQAECLLAKVQIRGFHVDKRHAELVLCWHERAMVATSAWRC 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00501 550 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 173 544 IPR005202 -
Phco8g00501 550 ProSiteProfiles GRAS family profile. 175 549 IPR005202 -
Phco8g00501 550 MobiDBLite consensus disorder prediction 42 64 - -
Phco8g00501 550 Pfam GRAS domain family 185 549 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00501 Phco-Chr8 4791994 4793646 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco8g00501 GRAS 9.5e-84 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00501 8 4791994 4793646 Phco8g00501 8 4791994 4793646 ECH
Phco4g01010 4 7987427 7989145 Phco8g00501 8 4791994 4793646 PCT