Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00445 ATGGCGGGTGTATTCTCATTAGGAGGAGGGAGAGGCAGTAACAACAACCAGCAAGACACCACTACCAACAACGAGATTCCTGCAGCCGAGACCCTATTCTGGTACAGCAAAAGCGACGACGTTTCATCCTACCGAGGGTTCGAGCTATGGAACCAGCAGCAGGAGCAGCATGTGATGCCCCCGCATGTGCGCCCCCTCCTGCAGCGAGATCTTTACTCGTCTGGTGTGGGACCCAGCCGAGGCGTCTCCGATGATCACTCCTCGTCTAGATCAGCGTTTGTGGCTATGCGCGCAGCGGAGGGTGGAATAAGCTGCCAGGACTGCGGGAACCAAGCCAAAAAAGATTGTCCTCACATGCGGTGCAGAACGTGCTGCAAGAGTCGAGGCTACGATTGCCAAACCCATGTCAAAAGCACTTGGGTTCCCGCTTCCAAACGTCGCGAGCGTCAACAACAGCTCGCTGCGTTGCAAGAACAGCAGCAACAACAGAGAGACCTTTCCAAACGGCCAAGAGACCCAACTGCTTGCACTCGTTTGCCCTCGTCAGAAGGGTTAGAAGAAGGGCATTTTCCTTCACTGGTGAGTTCTCCTGCTGAGTTCAGGTGCGTGAGGGTTAGCTGCGTGGAGGATGCTGATGACAGGTATGCATATCAAACGGCTGTGAACATTGGGGGACATGTGTTCAAAGGAATCCTTTATGACTATGGTCCTGAGAATAGCAATAATAATAACAGTAATAATAGTAATAATTACATGGCTGGGGAGACCTCTGCTGGTGTTGCTGGAGCTCAGCCCTTGAACCTCACTGCTTCTGGCGTTGTCTCTTCTTCTGGGGGACTTGTTGATCCTTCCTCCTTGTATTCAGCTCCAGTCAACACTTTCATGGGTGGCAGTGGTACGCAATTCTTCCCTCACACAAGATCTTGA 927 0.521 MAGVFSLGGGRGSNNNQQDTTTNNEIPAAETLFWYSKSDDVSSYRGFELWNQQQEQHVMPPHVRPLLQRDLYSSGVGPSRGVSDDHSSSRSAFVAMRAAEGGISCQDCGNQAKKDCPHMRCRTCCKSRGYDCQTHVKSTWVPASKRRERQQQLAALQEQQQQQRDLSKRPRDPTACTRLPSSEGLEEGHFPSLVSSPAEFRCVRVSCVEDADDRYAYQTAVNIGGHVFKGILYDYGPENSNNNNSNNSNNYMAGETSAGVAGAQPLNLTASGVVSSSGGLVDPSSLYSAPVNTFMGGSGTQFFPHTRS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00445 308 Coils Coil 146 169 - -
Phco8g00445 308 Pfam Domain of unknown function (DUF702) 102 238 - -
Phco8g00445 308 NCBIfam LRP1 C-terminal domain 189 237 IPR006511 -
Phco8g00445 308 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 292 IPR007818 GO:0003700|GO:0006355
Phco8g00445 308 MobiDBLite consensus disorder prediction 1 22 - -
Phco8g00445 308 NCBIfam putative zinc finger domain, LRP1 type 104 146 IPR006510 -
Phco8g00445 308 MobiDBLite consensus disorder prediction 156 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00445 Phco-Chr8 4152044 4153602 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Phco8g00445 DUF702 4.5e-64 No_clan