Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00360 ATGTCTGCTCATAAGATGTCGCTGGAGTTTATTGCAGGCATTTTCGCAGCAATGGTAGTGGCCTTACTCTACTGGCTCTTCAGGAGAAAGGTCATTCCACTTCTTAAGCAACGTAAGACTTTGAAAGGAAAGCAACATAAAAGCTTTGAAAATGATAAGATACCATTAAGGTATTTTGATTTTAAGGAACTAGAGAGAGCAACAGAAAATTTTAGCCAAGATTGCTTGCTGGGTTCTGGTGCATTTGGAAATGTCTACAAGGGAACCTTTGACTTAGAAGGAACACTAGCCATTAAGAGAGCTCATTCTGAATCATTCTCAAGTGTGGATGAATTCAGAAATGAAGTTAGGCTCCTTTCAGCTGTAAGGCACAGGAATCTTATTCGTCTGGTTGGATATTGTGAAGAACCAGAACAAGATGGAGCCAAAATACTAGTCTATGAATATGTTCCAAACGGTTCACTGCTTGAGTACATCATGGGAAGCAGAATGAGCTTAACTTGGAGGCGAAGAGTGAAAATAGCAATAGGAGCAGCAAGAGGCATAGCTTATCTGCATGAAGAGGTGAAGCCAAGCGTAATCCACCGTGACATCAAACCAAGTAACATCCTATTAGGGGTAGGTTTTGAGGCAAAGGTTTCGGATTTTGGGTTAGTAAAATCAGGGCCAACTGGTGATCAGTCACATGTGAGCAGCCAGATTAAAGGGACACCAGGGTACCTTGACCCTGCCTATTGTTCAAGCTTTCATTTGACCAAATTCAGTGACGTTTATAGCTTTGGTGTCATACTTTTGCAACTTGTTTCAGCTAGACCTGTGGTGGATTCCACTGAAAAACAAAGTAATCAACATATTATTGACTGGGCAAGGCCAAGCATAAAGAAGGGCAGTGTTGAAGAAATCATAGATGCAAATCTACTATGTCAAAGTGAGCCATGCAATATGGAAGTTATGCTGAAGATGGGGCAACTTGCTTTAAGATGTGTGGTTGAAGAACCAAAACATCGCCCAACAATGACTCAGGTCTGTCAAGAACTAGAGCGAGCCCTGTACTCAGCTGATAGCTTCAACAGCAACAAACAATCTTCAAAGGGATTCTTTACACCAATTGGCTTATCCCAGCAATCACCGAAGTCGGAGACTCGGGGATCAGTTGAATCACATGATTGTTCAGAGAGCTTTGTTAGTATTGATGGTGTTGGATTTCAGAAATTCCATGTTGATATGGATAGTTTCTCCTTTAAGAGCACAGACTTAAGGTGCCTAGAAAATAATAGTATTAGTATTGACAGGGAGAGAATATAA 1305 0.4107 MSAHKMSLEFIAGIFAAMVVALLYWLFRRKVIPLLKQRKTLKGKQHKSFENDKIPLRYFDFKELERATENFSQDCLLGSGAFGNVYKGTFDLEGTLAIKRAHSESFSSVDEFRNEVRLLSAVRHRNLIRLVGYCEEPEQDGAKILVYEYVPNGSLLEYIMGSRMSLTWRRRVKIAIGAARGIAYLHEEVKPSVIHRDIKPSNILLGVGFEAKVSDFGLVKSGPTGDQSHVSSQIKGTPGYLDPAYCSSFHLTKFSDVYSFGVILLQLVSARPVVDSTEKQSNQHIIDWARPSIKKGSVEEIIDANLLCQSEPCNMEVMLKMGQLALRCVVEEPKHRPTMTQVCQELERALYSADSFNSNKQSSKGFFTPIGLSQQSPKSETRGSVESHDCSESFVSIDGVGFQKFHVDMDSFSFKSTDLRCLENNSISIDRERI 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00360 434 Gene3D Phosphorylase Kinase; domain 1 33 149 - -
Phco8g00360 434 PANTHER OS01G0750732 PROTEIN 13 363 - -
Phco8g00360 434 SMART serkin_6 71 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00360 434 Gene3D Transferase(Phosphotransferase) domain 1 150 368 - -
Phco8g00360 434 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 150 353 - -
Phco8g00360 434 Pfam Protein kinase domain 74 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g00360 434 SUPERFAMILY Protein kinase-like (PK-like) 52 347 IPR011009 -
Phco8g00360 434 CDD STKc_IRAK 77 348 - -
Phco8g00360 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Phco8g00360 434 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524
Phco8g00360 434 FunFam Putative LRR receptor-like serine/threonine-protein kinase 37 149 - -
Phco8g00360 434 ProSiteProfiles Protein kinase domain profile. 71 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00360 Phco-Chr8 3305929 3308463 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phco8g00360 Pkinase 5e-41 CL0016